Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01706 and RBAM_010240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01706.1.9828.seq
# -bsequence dna-align/RBAM_010240___yhaH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01706-RBAM_010240___yhaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01706-RBAM_010240___yhaH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01706
# 2: RBAM_010240___yhaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 287/409 (70.2%)
# Similarity: 287/409 (70.2%)
# Gaps: 59/409 (14.4%)
# Score: 1119.0
#
#
#=======================================
BSNT_01706 1 ATGCTGAATGAATCCTATTTTGAAGAAAAAGACGGGGTGATTGTAATGGC 50
|||||
RBAM_010240__ 1 ---------------------------------------------ATGGC 5
BSNT_01706 51 -GAGCGGACGTTCTCTATTAACAGGACTATTCGTAGGCGGCATCATCGGA 99
|| |||||||||.||.||||||||.||.|||||||||||..|.||||||
RBAM_010240__ 6 TGA-CGGACGTTCCCTTTTAACAGGCCTTTTCGTAGGCGGATTGATCGGA 54
BSNT_01706 100 GGAGCAGCGGTTCTTCTTACT----GCACCTTCCTCAGGAAAGCAGCTGC 145
||.||||||| |.||||| ||.|||||.||.|||||..||||||
RBAM_010240__ 55 GGCGCAGCGG----TGTTACTCTCGGCTCCTTCATCCGGAAAAGAGCTGC 100
BSNT_01706 146 GTGAAAAAATGAAAACCAATTATGATTCTTTTGAAGAAACAATCAAACGC 195
|.|..|||||.|||.|.||||...||||..||||.||.|||||||||||.
RBAM_010240__ 101 GGGGCAAAATCAAAGCGAATTGCAATTCAATTGAGGACACAATCAAACGG 150
BSNT_01706 196 TTAAAGTCAGACGGGCTTGCATTAAAAGACCAGCTGATCAAAGCGGCAAA 245
|||||...||||||..|.||..|.||.||||||||..||.||.||||.||
RBAM_010240__ 151 TTAAAAAAAGACGGAATGGCGCTTAAGGACCAGCTTGTCCAAACGGCGAA 200
BSNT_01706 246 AGAAAGCACGGATGTTATTAAAGACGTGGGCGGCGAGCTCCAAACGTCA- 294
|||||||.|.||.||.|||||||||||.|||||.|||||.||.|| ||
RBAM_010240__ 201 AGAAAGCGCAGAAGTCATTAAAGACGTAGGCGGAGAGCTTCAGAC--CAG 248
BSNT_01706 295 -ATTAAAAAATGGCAGGAAGAGATCAAGCCTCACCAGCAGGATCTGCAAA 343
|||||||..||||||||.||.|||||.||.||||||||||||||.||.|
RBAM_010240__ 249 CATTAAAAGGTGGCAGGAGGAAATCAAACCGCACCAGCAGGATCTTCAGA 298
BSNT_01706 344 AAGAAATTGCCGATATCGAAGAGAAAATCAGACAGCTGGAGAAAACCTTA 393
|.|||||.||.|||||.|||||||||||||||||||||||||||||||||
RBAM_010240__ 299 AGGAAATCGCTGATATTGAAGAGAAAATCAGACAGCTGGAGAAAACCTTA 348
BSNT_01706 394 CAAAACTAA 402
|||||||||
RBAM_010240__ 349 CAAAACTAA 357
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