Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01703 and RBAM_010220

See DNA alignment / Visit BSNT_01703 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01703___yhaI.1.9828.seq
#    -bsequence pep-align/RBAM_010220___yhaI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01703___yhaI-RBAM_010220___yhaI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01703___yhaI-RBAM_010220___yhaI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01703___yhaI
# 2: RBAM_010220___yhaI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      90/113 (79.6%)
# Similarity:    99/113 (87.6%)
# Gaps:           3/113 ( 2.7%)
# Score: 465.0
# 
#
#=======================================

BSNT_01703___      1 ---MDHRIERLEYYIQLLVKTVDMDRYPFYGLLIDKGLSKEEGEAVMRIC     47
                        ||.||.||||||||||||||||:||||.::|:|||::||||.|.|||
RBAM_010220__      1 MDSMDQRIGRLEYYIQLLVKTVDMDKYPFYAMMIEKGLTEEEGEEVGRIC     50

BSNT_01703___     48 DELSEELATQKAQGFVTFDKLLALFAGQLNEKLDVHETIFALYEQGLYQE     97
                     .||.:||.:|||||||||||||||||||||||||||||||||||||||..
RBAM_010220__     51 RELEDELESQKAQGFVTFDKLLALFAGQLNEKLDVHETIFALYEQGLYTA    100

BSNT_01703___     98 LMEVFIDIMKHFD    110
                     |||.||:||||||
RBAM_010220__    101 LMEEFIEIMKHFD    113


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