Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01702 and RBAM_010210

See DNA alignment / Visit BSNT_01702 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01702.1.9828.seq
#    -bsequence pep-align/RBAM_010210___yhaK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01702-RBAM_010210___yhaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01702-RBAM_010210___yhaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01702
# 2: RBAM_010210___yhaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 176
# Identity:     129/176 (73.3%)
# Similarity:   140/176 (79.5%)
# Gaps:           4/176 ( 2.3%)
# Score: 662.0
# 
#
#=======================================

BSNT_01702         1 MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEY     50
                     |||||||||:|||||||::||||.||||.||..||||.||||..||||.:
RBAM_010210__      1 MNCWKTINLIKDYGAVRLLLTAVGFMILFFICNFLAFGLLRPNISLSDGH     50

BSNT_01702        51 VSLFGGLLVVILFAHKVIHVLPIICKKRKIEKKFYILRMRTWKRIPKTTM    100
                     |..|..||||.||.||||||||:||||||.|.|.|.|||.|||.||||||
RBAM_010210__     51 VFAFCVLLVVTLFVHKVIHVLPMICKKRKKEMKMYFLRMPTWKGIPKTTM    100

BSNT_01702       101 LISLVSPFLLITPVLFYAALAFPNHAHYFCMISGIHAGYCLPDFLLALKL    150
                     |||.:||||.|||:||||.||||.|||||.|||.|||||||||.|.||.|
RBAM_010210__    101 LISTISPFLFITPLLFYAGLAFPRHAHYFYMISSIHAGYCLPDLLFALHL    150

BSNT_01702       151 IKAPKTAFIDQEADGLDILVEK----    172
                     :||||:..||||:||.||||:|    
RBAM_010210__    151 VKAPKSCLIDQESDGFDILVKKVPES    176


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