Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01702 and RBAM_010210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01702.1.9828.seq
# -bsequence dna-align/RBAM_010210___yhaK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01702-RBAM_010210___yhaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01702-RBAM_010210___yhaK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01702
# 2: RBAM_010210___yhaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 402/541 (74.3%)
# Similarity: 402/541 (74.3%)
# Gaps: 32/541 ( 5.9%)
# Score: 1487.5
#
#
#=======================================
BSNT_01702 1 ATGAATTGCTGGAAGACCATAAATCTCATGAAGGATTATGGCGCCGTTCG 50
||||||||||||||.|||||.|||||.||.||.||||||||.||.|||||
RBAM_010210__ 1 ATGAATTGCTGGAAAACCATTAATCTGATCAAAGATTATGGTGCGGTTCG 50
BSNT_01702 51 CATAATATTAACTGCTGTATGTTTTATGATTTTGGTTTTTATATCTACCT 100
..||.||||.|||||||||.||||||||||..||.|||||||||..|.||
RBAM_010210__ 51 TTTATTATTGACTGCTGTAGGTTTTATGATCCTGTTTTTTATATGCAACT 100
BSNT_01702 101 TTTTAGCTTTTGAGCTGCTGCGGCCTGGCACA--AGCTTAAGCGATGAAT 148
|.||.||.||.|.|||||||||.|| |.|.| ||.|||||.||.|...
RBAM_010210__ 101 TCTTGGCATTCGGGCTGCTGCGTCC--GAATATCAGTTTAAGTGACGGGC 148
BSNT_01702 149 ATGTAT---CTTTATTCGGCGGTTTGCTCGTCGTTATTTTATTTGCACAT 195
|.||.| ||||.| |.|.|.|||||||.||||.||||||||.||||
RBAM_010210__ 149 ACGTGTTTGCTTTTT---GTGTTCTGCTCGTTGTTACTTTATTTGTACAT 195
BSNT_01702 196 AAAGTCATCCATGTCCTGCCAATCATCTGCAAAAAAAGAAAAATAGAAA- 244
||||||||.|||||||||||.||.|||||.|||||||||||||..||||
RBAM_010210__ 196 AAAGTCATACATGTCCTGCCGATGATCTGTAAAAAAAGAAAAAAGGAAAT 245
BSNT_01702 245 -AAAAGTTTTACATATTGCGCATGCGCACATGGAAACGCATACCAAAAAC 293
|||| |.|||.|.|||||.||||..|||||||||.|||||||.|||||
RBAM_010210__ 246 GAAAA--TGTACTTCTTGCGGATGCCGACATGGAAAGGCATACCGAAAAC 293
BSNT_01702 294 AACAATGCTGATTTCACTCG-TCAGCCCGTTCTTGCTGATTACACCGGTA 342
.||.|||||||||||| .|| ||||||||||.||..|.|||||.|||.||
RBAM_010210__ 294 GACGATGCTGATTTCA-ACGATCAGCCCGTTTTTATTCATTACGCCGTTA 342
BSNT_01702 343 TTGTTTTACGCAGCACTGGCATTTCCGAATCACGCTCATTATTTTTGCAT 392
||||||||.||.|.||||||||||||||..|||||||||||.||||..||
RBAM_010210__ 343 TTGTTTTATGCCGGACTGGCATTTCCGAGACACGCTCATTACTTTTATAT 392
BSNT_01702 393 GATCTCGGGCATTCACGCCGGCTACTGTCTGCCTGATTTCCTGCTGGCTC 442
|||.|||.||||.||.||.||.||.||.|||||||||.|.|||.|.||.|
RBAM_010210__ 393 GATTTCGAGCATCCATGCGGGGTATTGCCTGCCTGATCTTCTGTTTGCCC 442
BSNT_01702 443 TCAAGCTGATAAAAGCACCGAAAACCGCTTTTATTGATCAGGAAGCTGAC 492
|..|.|||.|.|||||.||.|||.|...|.|.|||||.||||||.|.|||
RBAM_010210__ 443 TGCATCTGGTCAAAGCGCCCAAATCATGTCTGATTGACCAGGAATCCGAC 492
BSNT_01702 493 GGCTTGGATATTCTTGTTGAAAAGTAG-------------- 519
||.||.||||||.|.|| ||||..||
RBAM_010210__ 493 GGTTTTGATATTTTAGT--AAAAAAAGTGCCGGAGTCTTGA 531
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