Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01698 and RBAM_010190

See DNA alignment / Visit BSNT_01698 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01698___prsA.1.9828.seq
#    -bsequence pep-align/RBAM_010190___prsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01698___prsA-RBAM_010190___prsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01698___prsA-RBAM_010190___prsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01698___prsA
# 2: RBAM_010190___prsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     229/294 (77.9%)
# Similarity:   261/294 (88.8%)
# Gaps:          11/294 ( 3.7%)
# Score: 1165.5
# 
#
#=======================================

BSNT_01698___      1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMKKTAG     50
                     |||||||||||||:||||||||||.:||||||||:|||||||||||||||
RBAM_010190__      1 MKKIAIAAITATSVLALSACSSGDNDVIAKTDAGNVTKGELYTNMKKTAG     50

BSNT_01698___     51 ASVLTQLVQEKVLDKKYKVSDKEIDNKLKEYKTQLGDQYTALEKQYGKDY    100
                     |||||||||||||.|||||:|||||.|||||||||||||::|::|||:||
RBAM_010190__     51 ASVLTQLVQEKVLAKKYKVTDKEIDTKLKEYKTQLGDQYSSLKQQYGEDY    100

BSNT_01698___    101 LKEQVKYELLTQKAAKDNIKVTDDEIKEYWEGLKGQIRASHILVADKKTA    150
                     ||:|||||||.||||||||||||.:.|||::||||:||||||||||||||
RBAM_010190__    101 LKDQVKYELLAQKAAKDNIKVTDSDTKEYYDGLKGKIRASHILVADKKTA    150

BSNT_01698___    151 EEIEKKLKKGEKFDALAKEYSTDTGSATNGGELGWISKDNEQLDSTFRKA    200
                     :|:||||||||||:.||||||||: |..|||:|||.  |.:.:|.||.||
RBAM_010190__    151 DEVEKKLKKGEKFETLAKEYSTDS-SKDNGGDLGWF--DKKSMDETFSKA    197

BSNT_01698___    201 AFKLKTNEVSDPVKTQFGYHIIKKTEERGKYDDMKKELKSEVLEQKLNDS    250
                     ||.||..:|||||||:|||||||||||||||||||||||.|||:|||||:
RBAM_010190__    198 AFGLKVGQVSDPVKTKFGYHIIKKTEERGKYDDMKKELKEEVLKQKLNDN    247

BSNT_01698___    251 NAVQEAVQKVMKKADIEVKDKDLKATFNTSSTSNSTSSSSSNSK    294
                     :|||.|:||||||||::|:|||||.|||||::|.|.        
RBAM_010190__    248 SAVQAAIQKVMKKADVKVEDKDLKDTFNTSTSSESK--------    283


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