Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01698 and RBAM_010190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01698___prsA.1.9828.seq
# -bsequence dna-align/RBAM_010190___prsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01698___prsA-RBAM_010190___prsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01698___prsA-RBAM_010190___prsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01698___prsA
# 2: RBAM_010190___prsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity: 697/897 (77.7%)
# Similarity: 697/897 (77.7%)
# Gaps: 57/897 ( 6.4%)
# Score: 2732.5
#
#
#=======================================
BSNT_01698___ 1 ATGAAGAAAATCGCAATAGCAGCTATCACTGCTACAAGCATCCTCGCTCT 50
||||||||||||||.|||||||||||.||.||.||.|||.||||.|||||
RBAM_010190__ 1 ATGAAGAAAATCGCGATAGCAGCTATTACGGCAACGAGCGTCCTGGCTCT 50
BSNT_01698___ 51 CAGTGCTTGCAGCAGCGGCGACAAAGAAGTCATCGCAAAAACAGACGCAG 100
|||.||||||||||||||||||||.||.||.||.||.||.||.||.||.|
RBAM_010190__ 51 CAGCGCTTGCAGCAGCGGCGACAACGACGTGATTGCCAAGACGGATGCCG 100
BSNT_01698___ 101 GCGATGTAACAAAAGGCGAGCTTTACACAAACATGAAGAAAACAGCTGGC 150
|..|||||||||||||||||||.|||||.||||||||.|||||.||.|||
RBAM_010190__ 101 GAAATGTAACAAAAGGCGAGCTCTACACGAACATGAAAAAAACCGCGGGC 150
BSNT_01698___ 151 GCAAGCGTACTGACACAGCTAGTGCAAGAAAAAGTATTGGACAAGAAGTA 200
|||||.||.|||||||||||.||.||||||||||||||.|..||.||.||
RBAM_010190__ 151 GCAAGTGTGCTGACACAGCTCGTACAAGAAAAAGTATTAGCAAAAAAATA 200
BSNT_01698___ 201 TAAAGTTTCGGATAAAGAAATTGACAACAAGCTGAAAGAATACAAAACGC 250
.|||||..|||||||||||||.||.|.||||||||||||.||||||||||
RBAM_010190__ 201 CAAAGTAACGGATAAAGAAATCGATACCAAGCTGAAAGAGTACAAAACGC 250
BSNT_01698___ 251 AGCTTGGCGATCAATATA-CTGCCCTCGAAAAGCAATATGGCAAGGATTA 299
||||.||||||||.||.| || ||||..||.||||.||.|||.|.|||||
RBAM_010190__ 251 AGCTCGGCGATCAGTACAGCT-CCCTTAAACAGCAGTACGGCGAAGATTA 299
BSNT_01698___ 300 CCTGAAAGAACAAGTAAAATATGAATTGCTGACACAAAAAGCGGCTAAAG 349
|||||||||.||.||.||.||.|||.||||..|||||||||||||.||||
RBAM_010190__ 300 CCTGAAAGATCAGGTGAAGTACGAACTGCTTGCACAAAAAGCGGCGAAAG 349
BSNT_01698___ 350 ATAACATCAAAGTAACAGATGATGAAATTAAAGAATACTGGGAAGGCTTA 399
|.|||||||||||.||.||....||.|..||||||||.|..||.||||||
RBAM_010190__ 350 ACAACATCAAAGTGACTGACTCCGATACGAAAGAATATTACGACGGCTTA 399
BSNT_01698___ 400 AAAGGCCAGATTCGCGCAAGCCACATCCTTGTCGCTGACAAAAAGACAGC 449
|||||..|.||.|||||.||||||||||||||||||||||||||||||||
RBAM_010190__ 400 AAAGGTAAAATCCGCGCGAGCCACATCCTTGTCGCTGACAAAAAGACAGC 449
BSNT_01698___ 450 TGAGGAAATAGAGAAAAAGCTGAAAAAAGGCGAGAAATTTGATGCCCTTG 499
|||.|||.|.||||||||||||||||||||||||||.|||||..|.||||
RBAM_010190__ 450 TGACGAAGTGGAGAAAAAGCTGAAAAAAGGCGAGAAGTTTGAAACGCTTG 499
BSNT_01698___ 500 CGAAGGAATACTCTACAGACACAGGCTCAGCTACA---AACGGTGGCGAA 546
||||.|||||.||.||.|||| ||||| |.| |||||.|||||.
RBAM_010190__ 500 CGAAAGAATATTCAACTGACA---GCTCA---AAAGACAACGGCGGCGAC 543
BSNT_01698___ 547 CTTGGCTGGATTTCAAAAGATAACGAA---CAACTGGATTCCACATTCAG 593
||||||||| ||| ||||| || ||| |||||...||||||||
RBAM_010190__ 544 CTTGGCTGG--TTC----GATAA--AAAGTCAA-TGGATGAAACATTCAG 584
BSNT_01698___ 594 AAAAGCTGCATTCAAGTTGAAA-----ACAAACGAAGTCAGCGATCCTGT 638
.||||||||||||....||||| || |||||||||||||.||
RBAM_010190__ 585 CAAAGCTGCATTCGGCCTGAAAGTCGGAC-----AAGTCAGCGATCCGGT 629
BSNT_01698___ 639 GAAAACACAATTTGGCTACCATATCATCAAAAAGACTGAAGAACGCGGCA 688
.||||||.||||.||.||.|||||||||||||||||.|||||||||||||
RBAM_010190__ 630 CAAAACAAAATTCGGTTATCATATCATCAAAAAGACAGAAGAACGCGGCA 679
BSNT_01698___ 689 AATACGATGATATGAAAAAAGAACTGAAATCTGAAGTGCTTGAACAAAAA 738
||||.|||||.||||||||||||||||||...|||||.|||.|.||.|||
RBAM_010190__ 680 AATATGATGACATGAAAAAAGAACTGAAAGAAGAAGTTCTTAAGCAGAAA 729
BSNT_01698___ 739 CTAAATGACAGCAATGCCGTTCAGGAAGCTGTTCAAAAAGTCATGAAGAA 788
.||||.||||.|...||.||.||||..||..||||||||||||||||.||
RBAM_010190__ 730 TTAAACGACAACTCAGCTGTACAGGCGGCAATTCAAAAAGTCATGAAAAA 779
BSNT_01698___ 789 GGCTGACATCGAAGTAAAAGATAAAGATCTGAAAGCCACATTTAATACAT 838
.||||||.|..||||..||||.|||||..|.||||.|||.|||||.|
RBAM_010190__ 780 AGCTGACGTAAAAGTGGAAGACAAAGACTTAAAAGACACGTTTAACA--- 826
BSNT_01698___ 839 CTTCAACAAGCAACAGCACTTCTTCATCTTCAAGCAATTCTAAATAA 885
||||| |||||||| |.|| |||||||||
RBAM_010190__ 827 CTTCA------------ACTTCTTC----TGAA-----TCTAAATAA 852
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