Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01693 and RBAM_010160

See DNA alignment / Visit BSNT_01693 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence pep-align/BSNT_01693___yhaN.1.9828.seq
#    -bsequence pep-align/RBAM_010160___yhaN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01693___yhaN-RBAM_010160___yhaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01693___yhaN-RBAM_010160___yhaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01693___yhaN
# 2: RBAM_010160___yhaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 964
# Identity:     549/964 (57.0%)
# Similarity:   716/964 (74.3%)
# Gaps:           8/964 ( 0.8%)
# Score: 2805.0
# 
#
#=======================================

BSNT_01693___      1 MRIISLHIYQYGKFSNRTFHFSASPVQVIYGLNEAGKTTMMSFIESMLFG     50
                     |:|.::|||||||||:|:|..|.||||||||||||||||:||||:|:|||
RBAM_010160__      1 MKITAMHIYQYGKFSDRSFQLSDSPVQVIYGLNEAGKTTLMSFIKSVLFG     50

BSNT_01693___     51 FPKTKKYEPKTGGVYGGVLEAEHPEYGVLKIERTKGTAEKLSVYTEKGEV    100
                     |||:||||||.||||||.:|.:|.::|.:|||||||.|||:.|||..||:
RBAM_010160__     51 FPKSKKYEPKNGGVYGGAVELKHGDHGAVKIERTKGAAEKVRVYTASGEI    100

BSNT_01693___    101 KQGDVLKQLFQGTDRSLYKAIYSFDVFGLQEIHAFNRDKIGEFLLFSSLF    150
                     |.|:.||||...|||:||:|||||||||||||.||||||||||||:||||
RBAM_010160__    101 KDGEWLKQLLSDTDRALYEAIYSFDVFGLQEIQAFNRDKIGEFLLYSSLF    150

BSNT_01693___    151 GAEAVSKLDSRLTKESERLYKPNGRNPQLNQELETLKQLAVKLKQAEAEE    200
                     |:||.:|||.||.||.:|:||||||||:|||||:|||:|:.:||||||.|
RBAM_010160__    151 GSEAAAKLDGRLAKELDRMYKPNGRNPRLNQELDTLKRLSAQLKQAEAAE    200

BSNT_01693___    201 AGYHQLLGEKRMLEARLAAAETELKETAGHIRMIEGAIERKPLLNEKATL    250
                     ||||.||.||:....||..||..||:....|:.::.|||.|||.::|..|
RBAM_010160__    201 AGYHSLLEEKKSAGGRLQDAEARLKDITEEIKTVKSAIEAKPLADKKTAL    250

BSNT_01693___    251 EQVIAEFPEHAGQFPADGLHQLEKYESHLHPKSAQLEALRVKMAELDKQR    300
                     |..::.:||...|||.||:|||||||||||||:|:||.||.|.|||.:|.
RBAM_010160__    251 ESELSSYPEALKQFPKDGMHQLEKYESHLHPKAARLEGLRAKSAELRRQA    300

BSNT_01693___    301 QKLIPDKELLAKETLIQELSAAFHMYQSCGEQLAAIQAQLRQASAQTAAG    350
                     ..|.|:::||.||..:||||...|||:|.||||||||:|:||.||:.::|
RBAM_010160__    301 DLLAPNEDLLQKERQLQELSGEQHMYESRGEQLAAIQSQIRQTSARVSSG    350

BSNT_01693___    351 LEQLNKTDENELLNMNTSYDYEWQLQQAVQQYVQARDRKRQLDETFELAR    400
                     |:||.:.:|:.:|::||.|:|||:||:|||...|||:||.|||..||.||
RBAM_010160__    351 LQQLGRHEEDGILSLNTDYEYEWRLQEAVQSAGQARERKTQLDAIFEQAR    400

BSNT_01693___    401 QELEDTEKAVRAASSAILEDSQRKDKEAALRAYDETQGQHQEQAKLREQL    450
                     .|||:.|:.....:..||:.:.||:|||||::|.:|  ...|..:.:..:
RBAM_010160__    401 LELEEAERKHALTAENILDPAVRKEKEAALQSYKQT--ADTEGNEWQAHV    448

BSNT_01693___    451 TFFERQQAKQKKTVIAVGMLFIVLFSLLQQWIPAISFGAALIVYWLVSGK    500
                     ...|:|:|||||..:..|:|||.:|::|::|:||..|..||::| ::||.
RBAM_010160__    449 QHLEKQRAKQKKLFLGAGILFIAIFAMLKEWLPAALFSGALLLY-MLSGM    497

BSNT_01693___    501 S----SSRNSRETRQPMTDISPAEAEMLREALWEDDRNKQHLLTQRAALQ    546
                     .    |.|.....::....||...|::|:|.||.|.|::|.|:..:|.|:
RBAM_010160__    498 QKPLPSERGGPGHKKKKPAISKEAADLLQEELWRDGRHRQQLIADQAVLE    547

BSNT_01693___    547 QKEAAYERVIQQFEQWEAEMAPSFTQVERFMNELGFKEDPSFLLDAYSLM    596
                     ||||||||||:|:|:||||||||..|.|.|||||||...||.|||||.:|
RBAM_010160__    548 QKEAAYERVIRQYEEWEAEMAPSEKQAELFMNELGFSGSPSHLLDAYHVM    597

BSNT_01693___    597 KDVKKEVKKKHELTIEAGRLKKHRRTFEERVSMLLPVNQSQDISISDALH    646
                     ||||||:..|||||||||||:|.:|.||:||..|.| :..:::|:.:.||
RBAM_010160__    598 KDVKKEILNKHELTIEAGRLQKLQRAFEDRVKKLSP-SDGRELSVKERLH    646

BSNT_01693___    647 TLRKNIEREKEIEKQKKEIETDIHYTKEQMLELEQEIQYFHAQIEQLFAA    696
                     .|....||.:|..|:|:.:|||:.:.:|||.||.:|:.|:..|::|||.|
RBAM_010160__    647 VLLAQAERAREEAKRKQALETDLLHAQEQMRELNEEVHYYEQQVKQLFMA    696

BSNT_01693___    697 AAAKDRDAFFAIADISRQLKDTENKLHHVNAQLQGGYPEELELADSNTLS    746
                     |.||:|:.|..:|.::...::||.:|..:...|.|...::||...|.|:|
RBAM_010160__    697 AGAKNREHFCELARLTESRRETERQLREIKTHLSGIGGKQLEPYMSRTVS    746

BSNT_01693___    747 ELKDKQFVENERKERLTEEIERLRSQIALLSVKQEQLEASGLVSDLKLQT    796
                     ||:.....:...|:.|.|:..:||.|.|||:|||||||:||||||||.||
RBAM_010160__    747 ELEHTVVQKETEKKTLEEKSAQLREQTALLTVKQEQLESSGLVSDLKQQT    796

BSNT_01693___    797 EMQKDRVKETAKKWASIQMVKQVIRNKLERHKKIELPRLLETAGEFFRPL    846
                     ||||:|||:|||:||::|.|:.:||.|:|||||:.|||||||||..:.||
RBAM_010160__    797 EMQKERVKKTAKEWAALQTVRHIIREKMERHKKVTLPRLLETAGALYVPL    846

BSNT_01693___    847 TDGNYQTIYFSETDDSIMVMHRDGTVYHAEELSQGTCEQLYTAIRFALAV    896
                     |||.|..:||||.|||||||.:||||:.|.||||..|||||.|||||||.
RBAM_010160__    847 TDGRYHKLYFSEADDSIMVMRKDGTVFSAGELSQAACEQLYAAIRFALAS    896

BSNT_01693___    897 TRQGGSKLPFQLDDSFVHFDQERLKRVLHVLYNLSEGGRQILYFTCHEHV    946
                     .|:....|||.|||||||||::||:|:..||..|||||||||||||||||
RBAM_010160__    897 ERESAVSLPFLLDDSFVHFDRQRLQRLFDVLNQLSEGGRQILYFTCHEHV    946

BSNT_01693___    947 KDAFHSSQIIHLVS    960
                     ..:|||.|::.|:|
RBAM_010160__    947 SRSFHSGQVMRLLS    960


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01693 and RBAM_010160

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
