Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01674 and RBAM_010000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence pep-align/BSNT_01674___yheD.1.9828.seq
# -bsequence pep-align/RBAM_010000___yheD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01674___yheD-RBAM_010000___yheD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01674___yheD-RBAM_010000___yheD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01674___yheD
# 2: RBAM_010000___yheD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 304/453 (67.1%)
# Similarity: 376/453 (83.0%)
# Gaps: 1/453 ( 0.2%)
# Score: 1680.0
#
#
#=======================================
BSNT_01674___ 1 MNPKRFLIGIDKTSENTLFLPSSLKRDGLLHAAFGTKVVRCHVAYRRHLE 50
||.|..::||||.|:||||||||:||:|||.||||||||:|.||:.:.||
RBAM_010000__ 1 MNHKGMIVGIDKKSKNTLFLPSSMKREGLLSAAFGTKVVKCRVAFSQSLE 50
BSNT_01674___ 51 QTVLLSENLFHELLLPHRSRADILIHDHTVHIGPLVGIFTAGFTVSLERP 100
::.||||:||.|||:||:||||.|||..|||||||:|:||||||.|..||
RBAM_010000__ 51 KSALLSEDLFEELLIPHKSRADFLIHGQTVHIGPLIGVFTAGFTSSPSRP 100
BSNT_01674___ 101 FKDRSLFFSKLVTLHEQAGGYCFVFGAHQINWEEGTIEGLLYRENGWEKK 150
.:||:.||||:::|||||.|||||||||||||||||::.|:|:||.|::.
RBAM_010000__ 101 LRDRTAFFSKMLSLHEQANGYCFVFGAHQINWEEGTVQALIYKENSWKRT 150
BSNT_01674___ 151 IVPLPNVVYDRLPNRKIEDSLLLQHTKKRLIDEYQIPWFNKTFFNKWNVH 200
.||||||||||||:||.|:..|||.||:||:::|||||||..|||||::|
RBAM_010000__ 151 AVPLPNVVYDRLPSRKTEEVPLLQQTKQRLMNDYQIPWFNPQFFNKWDIH 200
BSNT_01674___ 201 QLLEKDPRTAPFLPRSELTPSVELIDELCGAYKKVYIKPANGALGTGIYQ 250
:||||:..||..||:|.|.|:.|.::.||..:..||||||:||||||||:
RBAM_010000__ 201 KLLEKNSLTASLLPKSVLHPNAEALETLCSTFDTVYIKPADGALGTGIYK 250
BSNT_01674___ 251 LKRTDGGLTVKHTNDAKTFTSIDYSDAASFLAEFQKQQNPSDFLIQQGVD 300
:::||.||:|||||:.||..:.:|||||||:..|::..:||.||||||:|
RBAM_010000__ 251 VEKTDAGLSVKHTNEEKTVVTAEYSDAASFMTSFKENNDPSAFLIQQGID 300
BSNT_01674___ 301 LIEFQGKPADFRVHTNKNRKGKWTVTAIAVKISGKNSITTHLSNGGTVKT 350
||...|:|.|||||||||.:|||||||||.||||:|||||||:.||.|:|
RBAM_010000__ 301 LIRLDGRPVDFRVHTNKNAEGKWTVTAIAAKISGENSITTHLATGGEVRT 350
BSNT_01674___ 351 LAEVYDDPAERVEVIKKLSAAALTASHVLHDHIEGFIGEIGFDFGIDQNG 400
|||:|.||.|||.:::|||.|||..|.||::||||||||||||.|:|.:|
RBAM_010000__ 351 LAELYGDPRERVGMMRKLSKAALAVSRVLNEHIEGFIGEIGFDLGVDHSG 400
BSNT_01674___ 401 KVWMFEANSRPGRSIFSHPNLHHVDSLTKRRSFEYASYLSEKAIISPEAL 450
|||||||||||||||||||.|..||.|||||:|||||||||::|.:||.|
RBAM_010000__ 401 KVWMFEANSRPGRSIFSHPKLKSVDYLTKRRNFEYASYLSERSITAPEKL 450
BSNT_01674___ 451 WPS 453
|.
RBAM_010000__ 451 WR- 452
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