Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01668 and RBAM_009980

See DNA alignment / Visit BSNT_01668 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence pep-align/BSNT_01668___sspB.1.9828.seq
#    -bsequence pep-align/RBAM_009980___sspB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01668___sspB-RBAM_009980___sspB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01668___sspB-RBAM_009980___sspB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01668___sspB
# 2: RBAM_009980___sspB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 68
# Identity:      59/68 (86.8%)
# Similarity:    62/68 (91.2%)
# Gaps:           1/68 ( 1.5%)
# Score: 282.0
# 
#
#=======================================

BSNT_01668___      1 MANQNSSNDLLVPGAAQAIDQMKLEIASEFGVNLGADTTSRANGSVGGEI     50
                     |||.||||.|:||||||||||||.|||||||||||.:|||||||||||||
RBAM_009980__      1 MANNNSSNQLVVPGAAQAIDQMKYEIASEFGVNLGGETTSRANGSVGGEI     50

BSNT_01668___     51 TKRLVSFAQQQMGGR-VQ     67
                     ||||||||||.|||: ||
RBAM_009980__     51 TKRLVSFAQQNMGGQGVQ     68


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.