Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01668 and RBAM_009980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:20
# Commandline: needle
# -asequence dna-align/BSNT_01668___sspB.1.9828.seq
# -bsequence dna-align/RBAM_009980___sspB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01668___sspB-RBAM_009980___sspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01668___sspB-RBAM_009980___sspB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01668___sspB
# 2: RBAM_009980___sspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 172/208 (82.7%)
# Similarity: 172/208 (82.7%)
# Gaps: 5/208 ( 2.4%)
# Score: 705.0
#
#
#=======================================
BSNT_01668___ 1 ATGGCTAACCAAAACTCTTCAAA-TGACTTGCTAGTTCCTGGCGCAGCTC 49
|||||.|||.|.||||||||||| ..|||.| ||||.||.|||||.||||
RBAM_009980__ 1 ATGGCAAACAACAACTCTTCAAACCAACTAG-TAGTACCCGGCGCTGCTC 49
BSNT_01668___ 50 AGGCTATCGATCAAATGAAACTTGAAATCGCTTCTGAATTCGGCGTTAAC 99
|.||.|||||.|||||||||...|||||.||||||||.||||||||.|||
RBAM_009980__ 50 AAGCAATCGACCAAATGAAATACGAAATTGCTTCTGAGTTCGGCGTAAAC 99
BSNT_01668___ 100 CTTGGAGCGGACACAACTTCTCGCGCTAACGGTTCTGTCGGAGGAGAAAT 149
|||||.|..||.|||||||||||.||.|||||||||||||||||||||||
RBAM_009980__ 100 CTTGGCGGAGAAACAACTTCTCGTGCAAACGGTTCTGTCGGAGGAGAAAT 149
BSNT_01668___ 150 CACAAAACGTTTAGTATCTTTCGCTCAGCAGCAAATGGGCGGC---AGAG 196
|||.||||||||||||||||||||.||||||.|.||||||||| .|.|
RBAM_009980__ 150 CACTAAACGTTTAGTATCTTTCGCACAGCAGAACATGGGCGGCCAAGGCG 199
BSNT_01668___ 197 TTCAATAA 204
|.||||||
RBAM_009980__ 200 TACAATAA 207
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