Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02773 and RBAM_009920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_02773___ymcC.1.9828.seq
# -bsequence pep-align/RBAM_009920___ymcC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02773___ymcC-RBAM_009920___ymcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02773___ymcC-RBAM_009920___ymcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02773___ymcC
# 2: RBAM_009920___ymcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 109/185 (58.9%)
# Similarity: 144/185 (77.8%)
# Gaps: 2/185 ( 1.1%)
# Score: 627.0
#
#
#=======================================
BSNT_02773___ 1 MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLGLTPVIDLILL 50
||.|||:||.||.|||..::.|||.||:|:|..||:.|..|.|::|.:|.
RBAM_009920__ 1 MNAIAWLIVICEAAFWAAVIFGLAARYIFRRQKLGMFFFALIPLLDAVLF 50
BSNT_02773___ 51 AATGVDLYRGASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKG 100
.|...||||||:||.||.:||:|||:|:|:||.|||||||:|:|||.|:|
RBAM_009920__ 51 LAAAADLYRGAAATMAHAVAAIYIGVSVAFGKSMIQWADERFRYYVVKEG 100
BSNT_02773___ 101 AKPLKRFGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSARTEALS 150
|||:||:|:|:|||.||||.|||||::||..||||.::.|.|::||||||
RBAM_009920__ 101 AKPVKRYGLDYAKHYAKGWGRHVLAFVIGGVLLAGTVFLIQDASRTEALS 150
BSNT_02773___ 151 GILKLWTVIIGIDFLITASYFIWPKKEKASANLRS 185
.:||.|:|::.|||||.||:|:.|||.:.|..|
RBAM_009920__ 151 KLLKGWSVVLCIDFLIMASFFVMPKKRRNSREL-- 183
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