Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02773 and RBAM_009920

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:43
# Commandline: needle
#    -asequence pep-align/BSNT_02773___ymcC.1.9828.seq
#    -bsequence pep-align/RBAM_009920___ymcC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02773___ymcC-RBAM_009920___ymcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02773___ymcC-RBAM_009920___ymcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02773___ymcC
# 2: RBAM_009920___ymcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity:     109/185 (58.9%)
# Similarity:   144/185 (77.8%)
# Gaps:           2/185 ( 1.1%)
# Score: 627.0
# 
#
#=======================================

BSNT_02773___      1 MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLGLTPVIDLILL     50
                     ||.|||:||.||.|||..::.|||.||:|:|..||:.|..|.|::|.:|.
RBAM_009920__      1 MNAIAWLIVICEAAFWAAVIFGLAARYIFRRQKLGMFFFALIPLLDAVLF     50

BSNT_02773___     51 AATGVDLYRGASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKG    100
                     .|...||||||:||.||.:||:|||:|:|:||.|||||||:|:|||.|:|
RBAM_009920__     51 LAAAADLYRGAAATMAHAVAAIYIGVSVAFGKSMIQWADERFRYYVVKEG    100

BSNT_02773___    101 AKPLKRFGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSARTEALS    150
                     |||:||:|:|:|||.||||.|||||::||..||||.::.|.|::||||||
RBAM_009920__    101 AKPVKRYGLDYAKHYAKGWGRHVLAFVIGGVLLAGTVFLIQDASRTEALS    150

BSNT_02773___    151 GILKLWTVIIGIDFLITASYFIWPKKEKASANLRS    185
                     .:||.|:|::.|||||.||:|:.|||.:.|..|  
RBAM_009920__    151 KLLKGWSVVLCIDFLIMASFFVMPKKRRNSREL--    183


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