Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02774 and RBAM_009910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_02774___pksA.1.9828.seq
# -bsequence pep-align/RBAM_009910___pksA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02774___pksA-RBAM_009910___pksA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02774___pksA-RBAM_009910___pksA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02774___pksA
# 2: RBAM_009910___pksA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 129/204 (63.2%)
# Similarity: 165/204 (80.9%)
# Gaps: 10/204 ( 4.9%)
# Score: 694.0
#
#
#=======================================
BSNT_02774___ 1 MPKQIDHEKRRKQIAEATWRVILERGMEGASARNIAKEAGLSLGALRHYF 50
|||.||||||||||||||||.|||||||||:.||||:|||||||||||||
RBAM_009910__ 1 MPKIIDHEKRRKQIAEATWRTILERGMEGATVRNIAQEAGLSLGALRHYF 50
BSNT_02774___ 51 STQDELLAFAMKLVQEKVTDRIKDIAVRDLLPKEKVLQILLEMVPTNEET 100
:||||||.:||.||:||...||.::|::||.||||.::::||::||:|||
RBAM_009910__ 51 TTQDELLGYAMTLVKEKAAARINEVAMKDLPPKEKAVRLMLEIIPTDEET 100
BSNT_02774___ 101 IREMEVWFAFTAYARHKKDMFDANHDGIFSGMRNLIAYLDESDLLKQNAD 150
:.|||||||||||||||.:.|....|||.:.:|.||.:|||:.|||.|.|
RBAM_009910__ 101 MAEMEVWFAFTAYARHKGEEFQPQQDGILAYIRGLIDWLDENKLLKPNLD 150
BSNT_02774___ 151 KDIEAERLYALVDGLALHAMLDPVRVNKDRIKRVIMQHVESICVEGKRET 200
|:||||::||:.|||||||||:|.|::|::|.||::||:||:.:
RBAM_009910__ 151 KEIEAEKMYAIADGLALHAMLEPERLSKEKISRVLVQHIESLFI------ 194
BSNT_02774___ 201 EEKE 204
RBAM_009910__ 194 ---- 194
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