Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01654 and RBAM_009880

See DNA alignment / Visit BSNT_01654 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_01654___yhdZ.1.9828.seq
#    -bsequence pep-align/RBAM_009880___npdA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01654___yhdZ-RBAM_009880___npdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01654___yhdZ-RBAM_009880___npdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01654___yhdZ
# 2: RBAM_009880___npdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     192/247 (77.7%)
# Similarity:   216/247 (87.4%)
# Gaps:           0/247 ( 0.0%)
# Score: 1019.0
# 
#
#=======================================

BSNT_01654___      1 METFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRMEAMSL     50
                     ||.|.:::::|:|||||||||||||||||||||||||||||.|||||||.
RBAM_009880__      1 MEAFMTLINQAERIVVLTGAGMSTESGIPDFRSAGGIWTEDTSRMEAMSR     50

BSNT_01654___     51 DYFLSHPRLFWPKFKELFQMKMSGSFEPNEGHLFLAELEKQGKQVNIFTQ    100
                     :||...||.||||||:|||||||||:|||.||.:||:|||:||||:||||
RBAM_009880__     51 EYFERRPREFWPKFKQLFQMKMSGSYEPNAGHTYLADLEKRGKQVDIFTQ    100

BSNT_01654___    101 NIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLPHLLEREVPECTAAG    150
                     |||||||||||..||||||||||||||.|||||.|.|||:.|||||||..
RBAM_009880__    101 NIDGLHKKAGSSSVYELHGSIQTAACPRCGARYGLSHLLKDEVPECTAEI    150

BSNT_01654___    151 NNGDICGTVLKTDVVLFGDAVMHFDTLYEKLDQADLLLVIGTSLEVAPAR    200
                     .:..:||||||||||||||.|.||:|||||||:|||||||||||||||||
RBAM_009880__    151 GDHAVCGTVLKTDVVLFGDLVQHFETLYEKLDKADLLLVIGTSLEVAPAR    200

BSNT_01654___    201 FVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGIKK    247
                     ||||||..|||:|:|||||||||||.|||:|||:||||||:.:....
RBAM_009880__    201 FVPEDAGRIPGLKQVIINLEPTYCDHLFDLVIHEKIGEFAKRISAAT    247


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