Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01651 and RBAM_009860

See DNA alignment / Visit BSNT_01651 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_01651.1.9828.seq
#    -bsequence pep-align/RBAM_009860___yhdX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01651-RBAM_009860___yhdX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01651-RBAM_009860___yhdX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01651
# 2: RBAM_009860___yhdX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 47
# Identity:      28/47 (59.6%)
# Similarity:    32/47 (68.1%)
# Gaps:          13/47 (27.7%)
# Score: 139.0
# 
#
#=======================================

BSNT_01651         1 MILYNSKKGGEIMGKGRIRVEERIKAETDAEMQKATLLDQTQTKKGK     47
                                 |||||::||||||||||||:||||||.|||:||. 
RBAM_009860__      1 ------------MGKGRLKVEERIKAETDAEIQKATLLKQTQSKKK-     34


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