Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01649 and RBAM_009850

See DNA alignment / Visit BSNT_01649 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_01649___yhdW.1.9828.seq
#    -bsequence pep-align/RBAM_009850___yhdW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01649___yhdW-RBAM_009850___yhdW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01649___yhdW-RBAM_009850___yhdW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01649___yhdW
# 2: RBAM_009850___yhdW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     173/243 (71.2%)
# Similarity:   203/243 (83.5%)
# Gaps:           5/243 ( 2.1%)
# Score: 933.0
# 
#
#=======================================

BSNT_01649___      1 MYIIAHRGASGYAPENTIAAFDLAVKMNADMIELDVQLTKDRQIVVIHDD     50
                     ||.||||||||||||||.||||:|.:||||.||||||||||.||||||||
RBAM_009850__      1 MYTIAHRGASGYAPENTFAAFDIAAEMNADFIELDVQLTKDGQIVVIHDD     50

BSNT_01649___     51 RVDRTTNGSGFVKDFTLEELQKLDAGSWYGPAFQGERIPTLEAVLKRYHK    100
                     :|||||:||||||||||::||.||||||||..|:|||||.||.||||||.
RBAM_009850__     51 KVDRTTDGSGFVKDFTLKKLQSLDAGSWYGAEFKGERIPLLEEVLKRYHS    100

BSNT_01649___    101 KIGLLIELKGHPSQVGIEEEVGQLLGQFSFSINNIVQSFQFRSVQRFREL    150
                     :||.|||||||.||||:|:.|||||.:|||||:.|||||..:|:|.|.::
RBAM_009850__    101 EIGFLIELKGHVSQVGLEKAVGQLLSRFSFSIHPIVQSFSLKSIQTFHDM    150

BSNT_01649___    151 YPSIPTAVITRPNFGMLSRNQMKAFRSFANYVNIKYTRLNRLMIGSVHKN    200
                     ||.:|||:|.||:|||.|::|:.|::|..||||||||||||.:|.:.|::
RBAM_009850__    151 YPPVPTAIIARPSFGMFSKSQLNAYKSAVNYVNIKYTRLNRFLISTAHRH    200

BSNT_01649___    201 GLNIFAWTVNNQKTAAKLQAMGVDGIVTDYPDFIIKDGKHENI    243
                     ||.:|||||.|||||.|||.|.|||||||:||||.|||     
RBAM_009850__    201 GLKVFAWTVRNQKTAEKLQMMAVDGIVTDFPDFISKDG-----    238


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