Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01649 and RBAM_009850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:19
# Commandline: needle
# -asequence dna-align/BSNT_01649___yhdW.1.9828.seq
# -bsequence dna-align/RBAM_009850___yhdW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01649___yhdW-RBAM_009850___yhdW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01649___yhdW-RBAM_009850___yhdW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01649___yhdW
# 2: RBAM_009850___yhdW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 748
# Identity: 520/748 (69.5%)
# Similarity: 520/748 (69.5%)
# Gaps: 47/748 ( 6.3%)
# Score: 1724.5
#
#
#=======================================
BSNT_01649___ 1 TTGTACATCATTGCCCATCGCGGAGCATCCGGCTACGCTCCGGAAAATAC 50
|||||.|.|||.||.||||||||.||||||||.|||||.||.||||||||
RBAM_009850__ 1 TTGTATACCATCGCTCATCGCGGCGCATCCGGTTACGCGCCCGAAAATAC 50
BSNT_01649___ 51 GATTGCCGCATTTGACCTTGCGGTGAAAATGAATGCAGATATGATCGAAC 100
..||||.||||||||..|.||.|...|||||||.||.|||.|.||.||.|
RBAM_009850__ 51 ATTTGCGGCATTTGATATCGCTGCCGAAATGAACGCTGATTTCATTGAGC 100
BSNT_01649___ 101 TGGATGTCCAGCTTACAAAAGACAGGCAGATTGTTGTGATACACGATGAC 150
|.||.||||||||.|||||||||.|.||||||||.||.||.||.||||||
RBAM_009850__ 101 TTGACGTCCAGCTCACAAAAGACGGCCAGATTGTCGTCATCCATGATGAC 150
BSNT_01649___ 151 AGGGTTGACCGAACAACAAACGGATCGGGCTTTGTTAAGGATTTTACCTT 200
|..||.|||||.||.||..||||.||.||.|||||.||.||||||||..|
RBAM_009850__ 151 AAAGTCGACCGGACGACGGACGGCTCCGGTTTTGTAAAAGATTTTACGCT 200
BSNT_01649___ 201 GGAGGAATTGCAAAAACTCGATGCAGGAAGCTGGTACGGTCCCGCTTTTC 250
|.||.|..||||....||.|||||.||.||||||||.||..|.|..|||.
RBAM_009850__ 201 GAAGAAGCTGCAGTCTCTGGATGCCGGCAGCTGGTATGGGGCTGAGTTTA 250
BSNT_01649___ 251 AAGGAGAGCGTATTCCGACCCTG---GAAGCGGTGCTCAAGCGCTACCAC 297
||||.|||||.|||| ||||| ||||.|||..|.|||||.||.||.
RBAM_009850__ 251 AAGGGGAGCGGATTC---CCCTGCTCGAAGAGGTCTTGAAGCGTTATCAT 297
BSNT_01649___ 298 AAAAAAATCGGCCTTTTAATTGAACTAAAAGGCCATCCG--TCTCAAGTC 345
....|||||||..|||||||||||||.|||||.|| || |||||||||
RBAM_009850__ 298 TCTGAAATCGGTTTTTTAATTGAACTGAAAGGGCA--CGTTTCTCAAGTC 345
BSNT_01649___ 346 GGAATTGAAGAAGAGGTGGGACAGCTATTAGGGCA-ATTTTCTTTTTCTA 394
||..|||||.|||..||.||.|||||.||| .||| .|||||.|||||.|
RBAM_009850__ 346 GGTCTTGAAAAAGCAGTCGGCCAGCTGTTA-AGCAGGTTTTCCTTTTCCA 394
BSNT_01649___ 395 TCAATAATATTGTTCAATCCTTTCAGTTCCGC---TCCGTCCAAAGGTTC 441
||.|...|||.||||||| |.||||| ||.| ||..|.||.|..||.
RBAM_009850__ 395 TCCACCCTATCGTTCAAT-CATTCAG--CCTCAAGTCAATTCAGACCTTT 441
BSNT_01649___ 442 CGCGAGCTTTATCCTTCGATTCCGACAGCGGTCATTACAAGGCCCAACTT 491
|.|||..|.|||||..|..|||||||.||..|.|||.||||.||||.|||
RBAM_009850__ 442 CACGACATGTATCCGCCCGTTCCGACTGCAATAATTGCAAGACCCAGCTT 491
BSNT_01649___ 492 TGGCATGCTGTCCAGAAATCAGATGAAGGCCT-----TCCGCTCTTTTGC 536
.||.|||.|.||||.||..|||.||||.|||| ||.|| .|.
RBAM_009850__ 492 CGGGATGTTTTCCAAAAGCCAGCTGAACGCCTACAAATCAGC-----CGT 536
BSNT_01649___ 537 AAACTATGTCAATATAAAATACACACGGCTCAACCG--TCTGATGATCGG 584
|||.|||||||||||.|||||.||.||.||.||.|| ||| ||||...
RBAM_009850__ 537 AAATTATGTCAATATTAAATATACCCGCCTGAATCGGTTCT--TGATTTC 584
BSNT_01649___ 585 CTCCGTCCATAAAAATGGCTTAAACATATTTGCATGGACTGTCAACAATC 634
|.|||..||.|.|.|.|||.|.||..|||||||.|||||.||||..||||
RBAM_009850__ 585 CACCGCTCACAGACACGGCCTGAAAGTATTTGCCTGGACGGTCAGAAATC 634
BSNT_01649___ 635 AAAAGACAGCGGCAAAATTACAAGCCATGGGCGTGGACGGCATCGTTACA 684
|||||||.||.|.||||.|.|||...||||..||.||||||||.||.||.
RBAM_009850__ 635 AAAAGACGGCCGAAAAACTGCAAATGATGGCAGTTGACGGCATTGTAACT 684
BSNT_01649___ 685 GATTACCCGGATTTCATCATAAAGGATGGCAAACATGAAAATATATAG 732
||||..||||||||.||....||||||||| |||
RBAM_009850__ 685 GATTTTCCGGATTTTATTTCTAAGGATGGC-----TGA---------- 717
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