Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01648 and RBAM_009840

See DNA alignment / Visit BSNT_01648 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_01648___ccrB.1.9828.seq
#    -bsequence pep-align/RBAM_009840___yhdV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01648___ccrB-RBAM_009840___yhdV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01648___ccrB-RBAM_009840___yhdV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01648___ccrB
# 2: RBAM_009840___yhdV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:      82/133 (61.7%)
# Similarity:   100/133 (75.2%)
# Gaps:           4/133 ( 3.0%)
# Score: 408.5
# 
#
#=======================================

BSNT_01648___      1 MKIYSAVFIGGALGACLRYGLNLWIHTGQFPAATWLENAAGSLLLGILTG     50
                     ||.|.|:||||||||.||:.::..||:..|||||:||||||||.||::||
RBAM_009840__      1 MKQYIAIFIGGALGALLRFEMSAHIHSSSFPAATFLENAAGSLSLGLITG     50

BSNT_01648___     51 FFMIGAKRPLLSAFLGTGFCGGFTTMSTFSKETVMLLQGQPSLALLYVAA    100
                     :|:|.||||||:|||||||||||||||||:|||:.|||..|:.|..|.||
RBAM_009840__     51 YFIIRAKRPLLTAFLGTGFCGGFTTMSTFAKETIFLLQSSPAAAFCYFAA    100

BSNT_01648___    101 SLISGIIFALIGVFAGRRIAGIQQRKGLQER--    131
                     :|:|||..|..|:|.|||||  ....|.:..  
RBAM_009840__    101 TLVSGITLACAGIFWGRRIA--LHAAGREHDTP    131


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