Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01647 and RBAM_009830

See DNA alignment / Visit BSNT_01647 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_01647___ccrB.1.9828.seq
#    -bsequence pep-align/RBAM_009830___yhdU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01647___ccrB-RBAM_009830___yhdU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01647___ccrB-RBAM_009830___yhdU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01647___ccrB
# 2: RBAM_009830___yhdU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity:      67/119 (56.3%)
# Similarity:    91/119 (76.5%)
# Gaps:           1/119 ( 0.8%)
# Score: 352.0
# 
#
#=======================================

BSNT_01647___      1 MTLAGIFIGGGLGAMLRFWLGNVITAKTKGLSLPIGILTVNILGALGLGI     50
                     ||:..:.|..|:||:||..||..|:.:|||..:|:|:..||:||:.|||:
RBAM_009830__      1 MTIVLMLIAAGIGAVLRSLLGKTISERTKGFPMPLGMAAVNLLGSFGLGM     50

BSNT_01647___     51 FTGLHVANASVSLIIGTGFFGAFTTFSTFSVESIQLLMAKRVIESILYIA    100
                     ||||.:.|.|..:||.||||||||||||||:|::||:|..|:.||:||||
RBAM_009830__     51 FTGLGLDNPSAGIIIATGFFGAFTTFSTFSIEAVQLMMNNRIKESLLYIA    100

BSNT_01647___    101 LTLCGSLLAFWCGWT-ITI    118
                     ::..|||||||||:. |:|
RBAM_009830__    101 VSAAGSLLAFWCGFVMISI    119


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