Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01638 and RBAM_009760

See DNA alignment / Visit BSNT_01638 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence pep-align/BSNT_01638___sigM.1.9828.seq
#    -bsequence pep-align/RBAM_009760___sigM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01638___sigM-RBAM_009760___sigM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01638___sigM-RBAM_009760___sigM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01638___sigM
# 2: RBAM_009760___sigM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     161/163 (98.8%)
# Similarity:   162/163 (99.4%)
# Gaps:           0/163 ( 0.0%)
# Score: 836.0
# 
#
#=======================================

BSNT_01638___      1 MTIDEIYQMYMNDVYRFLLSMTKDKHLAEDLLQETFMRAYIHIHSYDHSK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_009760__      1 MTIDEIYQMYMNDVYRFLLSMTKDKHLAEDLLQETFMRAYIHIHSYDHSK     50

BSNT_01638___     51 VKPWLFQVARNAFIDYVRKHKKEVTISDDLIGSLFQNAVQSPAHQVEIKE    100
                     ||||||||||||||||||||||||||||||||||||.||||||||:||||
RBAM_009760__     51 VKPWLFQVARNAFIDYVRKHKKEVTISDDLIGSLFQTAVQSPAHQIEIKE    100

BSNT_01638___    101 VLTGYMSELPDNYREALTLYYLKELNYKEASHIMNISEANFKSVLFRARQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_009760__    101 VLTGYMSELPDNYREALTLYYLKELNYKEASHIMNISEANFKSVLFRARQ    150

BSNT_01638___    151 RLKALYNRGVNDE    163
                     |||||||||||||
RBAM_009760__    151 RLKALYNRGVNDE    163


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