Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01635 and RBAM_009740

See DNA alignment / Visit BSNT_01635 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence pep-align/BSNT_01635___yhdK.1.9828.seq
#    -bsequence pep-align/RBAM_009740___yhdK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01635___yhdK-RBAM_009740___yhdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01635___yhdK-RBAM_009740___yhdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01635___yhdK
# 2: RBAM_009740___yhdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 96
# Identity:      89/96 (92.7%)
# Similarity:    96/96 (100.0%)
# Gaps:           0/96 ( 0.0%)
# Score: 469.0
# 
#
#=======================================

BSNT_01635___      1 MELVRIFKEHNVFGWISVGTAVLSLLLLNLAIISNVTFYSYQMLPFAMAA     50
                     |||||||||||||||||||||:|||||||:||||||||||||||||||||
RBAM_009740__      1 MELVRIFKEHNVFGWISVGTAILSLLLLNVAIISNVTFYSYQMLPFAMAA     50

BSNT_01635___     51 VPFGVVELFIKRGRTGPGLLGVILNLFVIICVYTIVSVDTNLQFGF     96
                     ||||::|||||:|||||||||||||||||:||||||:|||||||||
RBAM_009740__     51 VPFGIIELFIKKGRTGPGLLGVILNLFVIVCVYTIVAVDTNLQFGF     96


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