Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01635 and RBAM_009740

See Amino acid alignment / Visit BSNT_01635 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence dna-align/BSNT_01635___yhdK.1.9828.seq
#    -bsequence dna-align/RBAM_009740___yhdK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01635___yhdK-RBAM_009740___yhdK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01635___yhdK-RBAM_009740___yhdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01635___yhdK
# 2: RBAM_009740___yhdK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     228/291 (78.4%)
# Similarity:   228/291 (78.4%)
# Gaps:           0/291 ( 0.0%)
# Score: 888.0
# 
#
#=======================================

BSNT_01635___      1 ATGGAACTGGTAAGAATTTTTAAAGAACACAATGTATTCGGCTGGATCTC     50
                     ||||||.|||||||||||||||||||.||.|||||.|||||||||||.||
RBAM_009740__      1 ATGGAATTGGTAAGAATTTTTAAAGAGCATAATGTTTTCGGCTGGATATC     50

BSNT_01635___     51 TGTCGGGACAGCGGTTCTGTCCCTGCTGTTGCTGAATTTGGCCATTATCA    100
                     .|||||.||.|||.||.||||.||||||.|..||||..||||.||.||||
RBAM_009740__     51 AGTCGGTACCGCGATTTTGTCGCTGCTGCTTTTGAACGTGGCAATCATCA    100

BSNT_01635___    101 GCAACGTCACGTTTTATTCCTATCAAATGCTTCCGTTCGCCATGGCTGCC    150
                     ||||.||.||.||.|||||.|||||.|||||.|||||.||.|||||.|||
RBAM_009740__    101 GCAATGTGACTTTCTATTCTTATCAGATGCTGCCGTTTGCGATGGCCGCC    150

BSNT_01635___    151 GTTCCGTTCGGCGTTGTTGAACTCTTCATCAAGAGAGGGCGCACAGGCCC    200
                     ||.|||||||||.|..||||.||.||.||.||.|.|||.||.||.|||||
RBAM_009740__    151 GTGCCGTTCGGCATCATTGAGCTGTTTATTAAAAAAGGACGGACGGGCCC    200

BSNT_01635___    201 CGGCCTGCTCGGCGTCATCCTTAATCTCTTTGTGATTATTTGTGTGTATA    250
                     .||.||||||||.|||||.||.|||||.||.||.|||.|.|||||.||||
RBAM_009740__    201 GGGACTGCTCGGTGTCATTCTCAATCTGTTCGTCATTGTCTGTGTATATA    250

BSNT_01635___    251 CCATTGTATCTGTAGATACGAATTTACAGTTTGGCTTTTAA    291
                     |.||.||..|.||.|||||||||.|.||.||.||.||||||
RBAM_009740__    251 CGATCGTTGCGGTTGATACGAATCTGCAATTCGGTTTTTAA    291


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