Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01631 and RBAM_009730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:18
# Commandline: needle
# -asequence pep-align/BSNT_01631___yhdH.1.9828.seq
# -bsequence pep-align/RBAM_009730___yhdH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01631___yhdH-RBAM_009730___yhdH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01631___yhdH-RBAM_009730___yhdH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01631___yhdH
# 2: RBAM_009730___yhdH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 360/451 (79.8%)
# Similarity: 415/451 (92.0%)
# Gaps: 0/451 ( 0.0%)
# Score: 1909.0
#
#
#=======================================
BSNT_01631___ 1 MSEQKTVQWASKIGFVMAAAGSAIGLGAIWKFPYVAGTNGGGAFFLIFVL 50
||:||.|||||||||:||||||||||||||||||||||||||||||:|||
RBAM_009730__ 1 MSDQKRVQWASKIGFIMAAAGSAIGLGAIWKFPYVAGTNGGGAFFLVFVL 50
BSNT_01631___ 51 FTILLGYPLLVGEFIFGRRNQTNAIDAYKKEAPRSAWFLTGWIGVAACFL 100
||:|||||||:||||||||:|||||||||:.||:|.|.|||::|||||||
RBAM_009730__ 51 FTVLLGYPLLLGEFIFGRRSQTNAIDAYKQAAPKSVWHLTGYVGVAACFL 100
BSNT_01631___ 101 VLSFYSVIGGWILLYIVKTASGSLSGLSQAQYGALFASIIQNPVQTLAAQ 150
|||||||:|||||||::|..:||||||:|.|||.:|.::|:||:|||.||
RBAM_009730__ 101 VLSFYSVVGGWILLYVLKAVTGSLSGLTQEQYGTVFGTVIENPIQTLIAQ 150
BSNT_01631___ 151 LVFMALTVLVVARGVQKGIERVSAVMMPILFLLFILLVLRSLTLNGAMEG 200
||||.:||.|||:||||||||||||:|||||:||:||||||:||:.|:||
RBAM_009730__ 151 LVFMIMTVAVVAKGVQKGIERVSAVLMPILFVLFLLLVLRSVTLDHAVEG 200
BSNT_01631___ 201 VKFLLVPHFGDLTPESILFGLGQAFFTLTLGVSVMVTYSSYLPKTQNIPR 250
::|||||||.||||||||:.|||||||||||||||||||||||||||:|.
RBAM_009730__ 201 IRFLLVPHFEDLTPESILYALGQAFFTLTLGVSVMVTYSSYLPKTQNLPG 250
BSNT_01631___ 251 SAASIVLMNIIVTLLAGLAIFPAVFSFGFQPNEGPTLLFTVLPAVFEQLP 300
||.|||:||::|||.||||||||||||||:|:||||||||||||||::||
RBAM_009730__ 251 SAGSIVMMNVLVTLFAGLAIFPAVFSFGFKPDEGPTLLFTVLPAVFDRLP 300
BSNT_01631___ 301 FGTLFFIGFLVAFLFAALTSAFSMVEIIVATIGKGDEKKRKKLSWTSGLL 350
||:||||.||..|.|||||||||||||||||:|||||.||||||||||||
RBAM_009730__ 301 FGSLFFISFLAVFFFAALTSAFSMVEIIVATVGKGDETKRKKLSWTSGLL 350
BSNT_01631___ 351 IFLVGIPCCLSYGVLSDVHLFGKTFFDIADFTVSNVLMPSGALLISLFIP 400
|||||||.|||||||.|||||||||||:|||||||||:|.||||||:|:|
RBAM_009730__ 351 IFLVGIPSCLSYGVLGDVHLFGKTFFDLADFTVSNVLIPLGALLISIFVP 400
BSNT_01631___ 401 LKISKSELLAEMRNGSNAGKAFFYTWFYLLRFIVPLAIIIVFLNLIGILS 450
|||.|.||.|||::||..|..||..|::||:::||||||:|.|:|||:||
RBAM_009730__ 401 LKIPKQELFAEMKSGSAIGYRFFQVWYFLLKYLVPLAIIVVLLHLIGVLS 450
BSNT_01631___ 451 F 451
|
RBAM_009730__ 451 F 451
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