Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01627 and RBAM_009710

See DNA alignment / Visit BSNT_01627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence pep-align/BSNT_01627___yhdF.1.9828.seq
#    -bsequence pep-align/RBAM_009710___yhdF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01627___yhdF-RBAM_009710___yhdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01627___yhdF-RBAM_009710___yhdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01627___yhdF
# 2: RBAM_009710___yhdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     233/289 (80.6%)
# Similarity:   260/289 (90.0%)
# Gaps:           0/289 ( 0.0%)
# Score: 1233.0
# 
#
#=======================================

BSNT_01627___      1 MNPMDRQTEGQEPQHQDRQPGIESKMNPLPLSEDEDYRGSGKLKGKVAII     50
                     |||||||||||:||.|.|||||||.|.|.||.||.|.:|||:||||||:|
RBAM_009710__      1 MNPMDRQTEGQKPQVQKRQPGIESDMEPKPLLEDPDVKGSGRLKGKVAVI     50

BSNT_01627___     51 TGGDSGIGRAAAIAFAKEGADISILYLDEHSDAEETRKRIEKENVRCLLI    100
                     ||||||||.|||||:||||||::|||||||:|||.|:||.|:....||||
RBAM_009710__     51 TGGDSGIGAAAAIAYAKEGADLAILYLDEHADAERTKKRAEEYQAECLLI    100

BSNT_01627___    101 AGDVGDENHCEQAVQQTVDHFGKLDILVNNAAEQHPQDSILNISTEQLEK    150
                     .||||||.||::||:|.:||:||:|||||||||||||:.||:|:.|||||
RBAM_009710__    101 PGDVGDEAHCQKAVRQVLDHYGKIDILVNNAAEQHPQNGILDITAEQLEK    150

BSNT_01627___    151 TYRTNIFSMFHMTKKALPHLQEGSAIINTTSITAYEGDTALIDYSSTKGA    200
                     |:|||:||||||||..|||||.|||||||||||||:|||:|||||.|||.
RBAM_009710__    151 TFRTNMFSMFHMTKAVLPHLQRGSAIINTTSITAYQGDTSLIDYSCTKGG    200

BSNT_01627___    201 IVSFTRSMAKSLADKGIRVNAVAPGPIWTPLIPATFPKEKVKQHGLDTPM    250
                     |||||||||.||||:||||||||||||||.||||||.:|||::|||||||
RBAM_009710__    201 IVSFTRSMAMSLADQGIRVNAVAPGPIWTALIPATFTEEKVEKHGLDTPM    250

BSNT_01627___    251 GRPGQPVEHAGAYVLLASDESSYMTGQTIHVNGGRFIST    289
                     ||||||.||||||||||||||||||||||||||||||||
RBAM_009710__    251 GRPGQPAEHAGAYVLLASDESSYMTGQTIHVNGGRFIST    289


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