Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01615 and RBAM_009640

See DNA alignment / Visit BSNT_01615 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_01615___yhdE.1.9828.seq
#    -bsequence pep-align/RBAM_009640___yhdE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01615___yhdE-RBAM_009640___yhdE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01615___yhdE-RBAM_009640___yhdE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01615___yhdE
# 2: RBAM_009640___yhdE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     123/146 (84.2%)
# Similarity:   133/146 (91.1%)
# Gaps:           2/146 ( 1.4%)
# Score: 636.0
# 
#
#=======================================

BSNT_01615___      1 MKLTNYTDYSLRVLIFLAAERPGELSNIKQIAETYSISKNHLMKVIYRLG     50
                     ||||||||||||||||||:....||||||:||:|||||||||||||||||
RBAM_009640__      1 MKLTNYTDYSLRVLIFLASRHSDELSNIKEIADTYSISKNHLMKVIYRLG     50

BSNT_01615___     51 QLGYVETIRGRGGGIRLGMEPEDINIGEVVRKTEDDFNIVECFDANKNLC    100
                     |||||||||||||||||||.|||||||||||.||||||||||||:.||||
RBAM_009640__     51 QLGYVETIRGRGGGIRLGMTPEDINIGEVVRNTEDDFNIVECFDSQKNLC    100

BSNT_01615___    101 VISPVCGLKHVLNEALLAYLAVLDKYTLRDLVKNKEDIMKLLKMKE    146
                     :|||.|.||::|||||.|||||||||||||||||||:||:||:.  
RBAM_009640__    101 IISPACNLKNLLNEALQAYLAVLDKYTLRDLVKNKEEIMRLLRS--    144


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