Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01615 and RBAM_009640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence dna-align/BSNT_01615___yhdE.1.9828.seq
# -bsequence dna-align/RBAM_009640___yhdE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01615___yhdE-RBAM_009640___yhdE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01615___yhdE-RBAM_009640___yhdE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01615___yhdE
# 2: RBAM_009640___yhdE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 445
# Identity: 331/445 (74.4%)
# Similarity: 331/445 (74.4%)
# Gaps: 14/445 ( 3.1%)
# Score: 1204.5
#
#
#=======================================
BSNT_01615___ 1 ATGAAGTTAACCAATTATACAGATTATTCATTAAGAGTGTTGATTTTTCT 50
|||||.|||||.||.|||||.||||||||.|||.|.||.|||||||||.|
RBAM_009640__ 1 ATGAAATTAACGAACTATACCGATTATTCTTTACGCGTTTTGATTTTTTT 50
BSNT_01615___ 51 GGC-TGCAGAGCGTCCCGGAGAACTTTCAAATATAAAACAGATTGCCGAA 99
||| |.|||| |.|.|||..||||||||.||.||||||.|.||.||.||.
RBAM_009640__ 51 GGCTTCCAGA-CATTCCGACGAACTTTCCAACATAAAAGAAATCGCAGAT 99
BSNT_01615___ 100 ACGTATTCTATTTCAAAAAATCATCTCATGAAAGTCATATACAGGCTCGG 149
||.|||||.||.||.|||||.||.||||||||||||||.|||.|.|||||
RBAM_009640__ 100 ACTTATTCCATCTCTAAAAACCACCTCATGAAAGTCATTTACCGCCTCGG 149
BSNT_01615___ 150 CCAGCTCGGCTACGTAGAAACGATACGCGGACGGGGCGGCGGCATACGAT 199
|||||||||.||.||.||||||||.||.||.|||||.|||||.||.||||
RBAM_009640__ 150 CCAGCTCGGGTATGTCGAAACGATCCGGGGCCGGGGAGGCGGAATCCGAT 199
BSNT_01615___ 200 TAGGCATGGAACCTGAAGACATCAACATCGGTGAGGTTGTCAGAAAAACG 249
||||.|||..|||.||||||||.|||||.||.||.||.||..||||.||.
RBAM_009640__ 200 TAGGAATGACACCGGAAGACATAAACATTGGAGAAGTCGTTCGAAATACA 249
BSNT_01615___ 250 GAGGACGATTTTAATATTGTTGAATGTTTTGA-TGCGAATAAGAATCTCT 298
||.|||||.|||||.||.||.|||||.||||| |.|.|| ||.|||||||
RBAM_009640__ 250 GAAGACGACTTTAACATCGTAGAATGCTTTGACTCCCAA-AAAAATCTCT 298
BSNT_01615___ 299 GTGTTATTTCCCCGGTTTGCGGCTTAAAACATGTGCTGAATGAAGCGCTT 348
||.|.||.||.||.|..|||..||||||..|..|.|||||||||||.||.
RBAM_009640__ 299 GTATCATATCTCCCGCCTGCAACTTAAAGAACCTTCTGAATGAAGCCCTG 348
BSNT_01615___ 349 TTGGCCTACCTCGCAGTTTTAGACAAATACACACTGCGCGACCTCGTCAA 398
...||.|||||.||.||||||||||||||.||..|..|.||.||.|||||
RBAM_009640__ 349 CAAGCTTACCTGGCCGTTTTAGACAAATATACGTTAAGGGATCTGGTCAA 398
BSNT_01615___ 399 AAACAAAGAAGATATCATGAAGCTTTTAAAAA--TGAAGGAATAG 441
|||||||||.||.||.||||..||..|.|.|| |||
RBAM_009640__ 399 AAACAAAGAGGAGATTATGAGACTGCTCAGAAGCTGA-------- 435
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