Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01611 and RBAM_009620

See DNA alignment / Visit BSNT_01611 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_01611___yhdC.1.9828.seq
#    -bsequence pep-align/RBAM_009620___yhdC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01611___yhdC-RBAM_009620___yhdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01611___yhdC-RBAM_009620___yhdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01611___yhdC
# 2: RBAM_009620___yhdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 107
# Identity:      71/107 (66.4%)
# Similarity:    91/107 (85.0%)
# Gaps:           0/107 ( 0.0%)
# Score: 398.0
# 
#
#=======================================

BSNT_01611___      1 MKSLPYTIALLFCGLIIVSMAAKGHSTDTNESVQKWEQLAWSKIQDEYKG     50
                     |||||:.:||||||::|.|:|.|||:...:.||:|||||||::::.||||
RBAM_009620__      1 MKSLPFALALLFCGILIASIAEKGHTEHLDPSVEKWEQLAWNQLEREYKG     50

BSNT_01611___     51 ASFSDYAYMGRTEVNDQQTKDVFRVTVRQKDDTFSVRAEVYFHPVTNHMI    100
                     |..:||:|||||:||.:||||||||||:...:|||.||||||||||.|:|
RBAM_009620__     51 AELTDYSYMGRTKVNREQTKDVFRVTVQTAKETFSSRAEVYFHPVTKHVI    100

BSNT_01611___    101 SINVFRL    107
                     |||:|||
RBAM_009620__    101 SINIFRL    107


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