Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01609 and RBAM_009600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence pep-align/BSNT_01609___yhdA.1.9828.seq
# -bsequence pep-align/RBAM_009600___yhdA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01609___yhdA-RBAM_009600___yhdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01609___yhdA-RBAM_009600___yhdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01609___yhdA
# 2: RBAM_009600___yhdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity: 122/175 (69.7%)
# Similarity: 151/175 (86.3%)
# Gaps: 1/175 ( 0.6%)
# Score: 639.0
#
#
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BSNT_01609___ 1 -MNMLVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEADQS 49
|::|||:|||||:||||||||||...:|||.|||||..||::|||.:|:
RBAM_009600__ 1 MMSILVISGTPRKNGRTRIAASYIRDRFHTDFIDLSESELPLYNGEEEQN 50
BSNT_01609___ 50 ELLKVQELKKRVTKADAIVLLSPEYHSGMSGALKNALDFLSSEQFKYKPV 99
||..||||:::|.|:.|:||||||||||||||||||:|||||:.:.||||
RBAM_009600__ 51 ELPTVQELRRQVKKSAAVVLLSPEYHSGMSGALKNAIDFLSSDHWAYKPV 100
BSNT_01609___ 100 ALLAVAGGGKGGINALNNMRTVMRGVYANVIPKQLVLDPVHIDVENATVA 149
|::|.|||||||:|||.||||||||||||||||||||||:|||:|..||:
RBAM_009600__ 101 AIIAAAGGGKGGMNALANMRTVMRGVYANVIPKQLVLDPIHIDMERRTVS 150
BSNT_01609___ 150 ENIKESIKELVEELSMFAKTGNPGV 174
|::..|:||::|||:||....||||
RBAM_009600__ 151 EDMAVSLKEMIEELNMFTNIRNPGV 175
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