Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01605 and RBAM_009580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence pep-align/BSNT_01605___yhcY.1.9828.seq
# -bsequence pep-align/RBAM_009580___yhcY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01605___yhcY-RBAM_009580___yhcY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01605___yhcY-RBAM_009580___yhcY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01605___yhcY
# 2: RBAM_009580___yhcY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 382
# Identity: 263/382 (68.8%)
# Similarity: 302/382 (79.1%)
# Gaps: 5/382 ( 1.3%)
# Score: 1316.5
#
#
#=======================================
BSNT_01605___ 1 MSK--MRMEKLKTLKTIAETLNQGHDIKATLDEVLKELLSLTNLQSGWIF 48
|:| ..:|.|||||.|||||||.||:|..||:||:||||||.||:||||
RBAM_009580__ 1 MTKTTTTVETLKTLKAIAETLNQSHDLKEALDKVLRELLSLTGLQTGWIF 50
BSNT_01605___ 49 LIEEDGSYTLAADAYLPPALSRKEKVLMCEGECYCLTKFNNGGLRKAANI 98
|||.||||||||.|||||||.::|..|||.|||||||||:||||.||.||
RBAM_009580__ 51 LIEPDGSYTLAASAYLPPALGQRENALMCSGECYCLTKFSNGGLTKAVNI 100
BSNT_01605___ 99 MNCKRIESAE-NLHCFDTEGITHHATVPLEDGDRRFGLLNVAAAGKTMFD 147
|||||||.|| ..:|.||||||||||||||||.|:||||||||:.||.|:
RBAM_009580__ 101 MNCKRIEFAEQTTNCRDTEGITHHATVPLEDGGRKFGLLNVAASEKTFFN 150
BSNT_01605___ 148 EEELHLLESVAFQIGTAIQRMRLSEYQQKNALLMERNRLAQELHDSVNQM 197
||||||||:||||||||||||:|:|::|:|||||||:|||||||||||||
RBAM_009580__ 151 EEELHLLEAVAFQIGTAIQRMKLAEFEQQNALLMERSRLAQELHDSVNQM 200
BSNT_01605___ 198 LFSVSLTAKAAKTLTKDENLQQMIEFIQNLSQDALAEMKALIWQLRPGGL 247
||||||||||||:.|.|:.|:|||.|||.||||||.||:||||||:|..|
RBAM_009580__ 201 LFSVSLTAKAAKSFTDDDRLRQMITFIQELSQDALTEMRALIWQLKPESL 250
BSNT_01605___ 248 EKGLAEAIKSYGALIGLKIIFTQKGCPVLTDEQEHMLWRVVQEALNNCKK 297
.|||..:||||.|||||:.:...:....|||||||.|||:.|||||||||
RBAM_009580__ 251 TKGLYASIKSYAALIGLEAVCEMEDELELTDEQEHALWRIAQEALNNCKK 300
BSNT_01605___ 298 HAGTDTAYVSLTASLCHAELDIIDHGAGFRYEAHAGLPSLGIKGMKERAE 347
|||||...:|.......|||.|.|.||||..:|||.|||||:.|||.|||
RBAM_009580__ 301 HAGTDRVIISAVKKPDCAELHISDRGAGFSADAHAVLPSLGVAGMKARAE 350
BSNT_01605___ 348 KAGAKFWIESALGTGTKLSIRLPLTSRKGGAV 379
..|.:|.::|.||.||.:|:|||...|:..
RBAM_009580__ 351 AIGGRFTLQSDLGAGTIVSVRLPFRDRRSD-- 380
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