Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01599 and RBAM_009540

See DNA alignment / Visit BSNT_01599 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence pep-align/BSNT_01599___glpF.1.9828.seq
#    -bsequence pep-align/RBAM_009540___glpF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01599___glpF-RBAM_009540___glpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01599___glpF-RBAM_009540___glpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01599___glpF
# 2: RBAM_009540___glpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     238/276 (86.2%)
# Similarity:   258/276 (93.5%)
# Gaps:           2/276 ( 0.7%)
# Score: 1274.0
# 
#
#=======================================

BSNT_01599___      1 -MTAFWGEVIGTMLLIIFGAGVCAGVNLKKSLSFQSGWIVVVFGWGLGVA     49
                      ||||||||||||||:|||.|||||||||||||:||||||:|||||||||
RBAM_009540__      1 MMTAFWGEVIGTMLLVIFGGGVCAGVNLKKSLSYQSGWIVIVFGWGLGVA     50

BSNT_01599___     50 MAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVI     99
                     |||||||.||||||||||||.||..|.|||||||||||.|||||:||||:
RBAM_009540__     51 MAAYAVGSISGAHLNPALTIGLALEGSFPWKEVPVYIAGQMIGAMIGAVV    100

BSNT_01599___    100 IYLHYLPHWKSTDDPAAKLGVFSTGPSIPHTFANVLSEVIGTFVLVLGIL    149
                     ::||||||||:|||||||||||||||||||||.|::||||||||||||||
RBAM_009540__    101 VFLHYLPHWKATDDPAAKLGVFSTGPSIPHTFGNMISEVIGTFVLVLGIL    150

BSNT_01599___    150 AIGANQFTEGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFL    199
                     |||||:||:|||||||||||||||||||||||||||||||||||||||||
RBAM_009540__    151 AIGANEFTKGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFL    200

BSNT_01599___    200 PIPGKGSSNWKYAWVPVVGPILGGSFGGVFYNAAFKGHITSSFWIVSVIL    249
                     |||.||.|||||||:||||||:||:||||||||||||::|.|||.||||:
RBAM_009540__    201 PIPKKGPSNWKYAWIPVVGPIMGGAFGGVFYNAAFKGNVTPSFWFVSVIM    250

BSNT_01599___    250 VVVLLGLYVYT-KSYSAKTLSNSKYI    274
                     ||||..||:|| ||.|.||||||:||
RBAM_009540__    251 VVVLFILYIYTKKSQSQKTLSNSEYI    276


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