Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01597 and RBAM_009520
See
DNA alignment /
Visit
BSNT_01597 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence pep-align/BSNT_01597___yhxA.1.9828.seq
# -bsequence pep-align/RBAM_009520___yhxA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01597___yhxA-RBAM_009520___yhxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01597___yhxA-RBAM_009520___yhxA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01597___yhxA
# 2: RBAM_009520___yhxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 374/447 (83.7%)
# Similarity: 411/447 (91.9%)
# Gaps: 2/447 ( 0.4%)
# Score: 2028.0
#
#
#=======================================
BSNT_01597___ 1 MENIQQNQGLKQKDEQFVWHAMKGAHQADSLIAQKAEGAWVTDIDGRRYL 50
||::|:||.|||||::.:|||||||...||:|.||.||||||||||||||
RBAM_009520__ 1 MEHVQKNQSLKQKDKELIWHAMKGAEPDDSIIVQKGEGAWVTDIDGRRYL 50
BSNT_01597___ 51 DAMSGLWCVNIGYGRKELAEAAYEQLKELPYYPLTQSHAPAIQLAEKLNE 100
|.|||||||||||||||||:|||.||||||||||||||.|||::||||||
RBAM_009520__ 51 DGMSGLWCVNIGYGRKELADAAYSQLKELPYYPLTQSHQPAIEVAEKLNE 100
BSNT_01597___ 101 WLGGDYVIFFSNSGSEANETAFKIARQYHLQNGDHSRYKFISRYRAYHGN 150
|||||||||||||||||||||||||||||::||||||:|||||||.||||
RBAM_009520__ 101 WLGGDYVIFFSNSGSEANETAFKIARQYHIENGDHSRFKFISRYRGYHGN 150
BSNT_01597___ 151 TLGALSATGQAQRKYKYEPLSQGFLHAAPPDIYRNPDDADTLESANEIDR 200
|:|||:|||||||||||||||||||||||||:||||.||.|||||::|||
RBAM_009520__ 151 TMGALAATGQAQRKYKYEPLSQGFLHAAPPDLYRNPGDAVTLESAHDIDR 200
BSNT_01597___ 201 IMTWELSETIAGVIMEPIITGGGILMPPDGYMKKVEDICRRHGALLICDE 250
||||||||||||||||||||||||||||||||.||||||||||||||.||
RBAM_009520__ 201 IMTWELSETIAGVIMEPIITGGGILMPPDGYMAKVEDICRRHGALLISDE 250
BSNT_01597___ 251 VICGFGRTGEPFGFMHYGVKPDIITMAKGITSAYLPLSATAIKRDIFEAY 300
||||||||||||||.||||.|||:|||||||||||||||||:||:|||||
RBAM_009520__ 251 VICGFGRTGEPFGFQHYGVSPDIVTMAKGITSAYLPLSATAVKREIFEAY 300
BSNT_01597___ 301 QGEAPYDRFRHVNTFGGSPAACALALKNLQIMEDELLIQRSRDLGAKLLG 350
.|..||.||||||||||:||||||||||||:||||.||.|||:||.:||.
RBAM_009520__ 301 SGGEPYGRFRHVNTFGGNPAACALALKNLQLMEDENLIARSRELGERLLR 350
BSNT_01597___ 351 ELQALREHPAVGDVRGKGLLIGIELVKDKLTKEPADAAKVNQVVAACKEK 400
||:.||||||||||||||||.||||||||:||||||||.|..|:.||:||
RBAM_009520__ 351 ELEPLREHPAVGDVRGKGLLAGIELVKDKITKEPADAALVQHVITACREK 400
BSNT_01597___ 401 GLIIGKNGDTVAGYNNVIQLAPPFCLTEEDLSFIVKTVKESFQTI-- 445
||::||||||||||||||||:|||||::|:||||:.|||||..:|
RBAM_009520__ 401 GLLVGKNGDTVAGYNNVIQLSPPFCLSDEELSFIISTVKESVLSIDF 447
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.