Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01592 and RBAM_009500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence pep-align/BSNT_01592___yhcW.1.9828.seq
# -bsequence pep-align/RBAM_009500___yhcW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01592___yhcW-RBAM_009500___yhcW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01592___yhcW-RBAM_009500___yhcW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01592___yhcW
# 2: RBAM_009500___yhcW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 185/229 (80.8%)
# Similarity: 205/229 (89.5%)
# Gaps: 9/229 ( 3.9%)
# Score: 975.0
#
#
#=======================================
BSNT_01592___ 1 MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGF 50
||||||||||||||||||||||||||:||||||.||||||||||||||||
RBAM_009500__ 1 MIKALIFDFDGLILDTETHEYEVLQEMFEEHGSTLPLSVWGKVIGTAAGF 50
BSNT_01592___ 51 RPFEYLEEQIGKKLNHEELTQLRRERFAKRMETEKARPGVEAYLNAAKDL 100
:||.|||||:|:||:|:|||.:||.||.:||:||.|||||||||.|||:|
RBAM_009500__ 51 KPFAYLEEQLGRKLDHDELTAIRRGRFEQRMKTETARPGVEAYLAAAKEL 100
BSNT_01592___ 101 GLKIGLASSSDYKWVSGHLKQIGLFDDFEVIQTADDVEEVKPNPELYLLA 150
|||:|||||||:||||||||::||||:|||||||||||||||||||||.|
RBAM_009500__ 101 GLKVGLASSSDFKWVSGHLKELGLFDEFEVIQTADDVEEVKPNPELYLKA 150
BSNT_01592___ 151 AKNLGVSPAECLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHR 200
|::|||.|:||||||||||||||||||||||||||||||..|:||:||||
RBAM_009500__ 151 AEHLGVEPSECLAFEDSVNGSIAAKRAGMKCVIVPNKVTSALLFEEYDHR 200
BSNT_01592___ 201 LESMAEMELALLLDHLNSQN--------- 220
|||||||||.|||..||.||
RBAM_009500__ 201 LESMAEMELELLLQRLNDQNEPAGGSSIV 229
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