Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01592 and RBAM_009500

See DNA alignment / Visit BSNT_01592 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence pep-align/BSNT_01592___yhcW.1.9828.seq
#    -bsequence pep-align/RBAM_009500___yhcW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01592___yhcW-RBAM_009500___yhcW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01592___yhcW-RBAM_009500___yhcW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01592___yhcW
# 2: RBAM_009500___yhcW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity:     185/229 (80.8%)
# Similarity:   205/229 (89.5%)
# Gaps:           9/229 ( 3.9%)
# Score: 975.0
# 
#
#=======================================

BSNT_01592___      1 MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGF     50
                     ||||||||||||||||||||||||||:||||||.||||||||||||||||
RBAM_009500__      1 MIKALIFDFDGLILDTETHEYEVLQEMFEEHGSTLPLSVWGKVIGTAAGF     50

BSNT_01592___     51 RPFEYLEEQIGKKLNHEELTQLRRERFAKRMETEKARPGVEAYLNAAKDL    100
                     :||.|||||:|:||:|:|||.:||.||.:||:||.|||||||||.|||:|
RBAM_009500__     51 KPFAYLEEQLGRKLDHDELTAIRRGRFEQRMKTETARPGVEAYLAAAKEL    100

BSNT_01592___    101 GLKIGLASSSDYKWVSGHLKQIGLFDDFEVIQTADDVEEVKPNPELYLLA    150
                     |||:|||||||:||||||||::||||:|||||||||||||||||||||.|
RBAM_009500__    101 GLKVGLASSSDFKWVSGHLKELGLFDEFEVIQTADDVEEVKPNPELYLKA    150

BSNT_01592___    151 AKNLGVSPAECLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHR    200
                     |::|||.|:||||||||||||||||||||||||||||||..|:||:||||
RBAM_009500__    151 AEHLGVEPSECLAFEDSVNGSIAAKRAGMKCVIVPNKVTSALLFEEYDHR    200

BSNT_01592___    201 LESMAEMELALLLDHLNSQN---------    220
                     |||||||||.|||..||.||         
RBAM_009500__    201 LESMAEMELELLLQRLNDQNEPAGGSSIV    229


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