Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01587 and RBAM_009470

See DNA alignment / Visit BSNT_01587 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence pep-align/BSNT_01587___yhcT.1.9828.seq
#    -bsequence pep-align/RBAM_009470___yhcT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01587___yhcT-RBAM_009470___yhcT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01587___yhcT-RBAM_009470___yhcT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01587___yhcT
# 2: RBAM_009470___yhcT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     214/302 (70.9%)
# Similarity:   244/302 (80.8%)
# Gaps:           0/302 ( 0.0%)
# Score: 1124.0
# 
#
#=======================================

BSNT_01587___      1 MNQKGRGLEILINEKQDGQWLFSVLKTALKASKPVIQDWMSHQQIKVNHE     50
                     |.|..||||:||.||..|||||||||:..:||||||.:||:.:.|:||..
RBAM_009470__      1 MKQNDRGLELLITEKHAGQWLFSVLKSEFQASKPVITEWMNQESIQVNRT     50

BSNT_01587___     51 SVLNNMIVKKGDRVFIDLQESEASSVIPEYGELDILFEDNHMLIINKPAG    100
                     ...||:|:|.|||:||||||...|||.|||||.|||||||||||.|||||
RBAM_009470__     51 PTKNNIILKTGDRLFIDLQEKTGSSVTPEYGEPDILFEDNHMLIANKPAG    100

BSNT_01587___    101 IATHPNEDGQTGTLANLIAYHYQINGETCKVRHVHRLDQDTSGAIVFAKH    150
                     :.|||||:||||||:||||||:.||||..|||||||||:|||||:|||||
RBAM_009470__    101 MPTHPNEEGQTGTLSNLIAYHFHINGEQAKVRHVHRLDRDTSGAVVFAKH    150

BSNT_01587___    151 RLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINSPIGRDRSHPTRRR    200
                     ||||||||:|||.|||||||.|.||||:..||||::|||||||||..|||
RBAM_009470__    151 RLAHAILDRQLETKTLKRTYIAAAEGKVTPKKGTVDSPIGRDRSHSVRRR    200

BSNT_01587___    201 VSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRVHLASLGHPLT    250
                     ||||||.||||:||...:...:|:|.|||||||||||||||:||:||||.
RBAM_009470__    201 VSPGGQAAVTHYKVKDYHPGAQLTLAELELETGRTHQIRVHMASIGHPLA    250

BSNT_01587___    251 GDSLYGGGSKLLNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTY    300
                     ||.||||...|.:||||||.||..||||:.|.||||||.|||:.:...||
RBAM_009470__    251 GDDLYGGSRTLFHRQALHAKKVSVVHPISGEEIVAEAPMPADLAHFTETY    300

BSNT_01587___    301 FS    302
                     ||
RBAM_009470__    301 FS    302


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