Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01586 and RBAM_009460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence pep-align/BSNT_01586___yhcS.1.9828.seq
# -bsequence pep-align/RBAM_009460___yhcS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01586___yhcS-RBAM_009460___yhcS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01586___yhcS-RBAM_009460___yhcS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01586___yhcS
# 2: RBAM_009460___yhcS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 135/203 (66.5%)
# Similarity: 164/203 (80.8%)
# Gaps: 10/203 ( 4.9%)
# Score: 698.0
#
#
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BSNT_01586___ 1 MKKV--IPLFIIAAGLVIAGYGGFKLIDTNMKTEQTLKEAKLAAEKPQEP 48
|.|: |||.:|..|::|..||.:|:||::|||..:|:||| |..||
RBAM_009460__ 1 MNKLKHIPLLVIIVGIIITCYGSWKIIDSHMKTNHSLEEAK----KATEP 46
BSNT_01586___ 49 LGTKNSTDQA---KNKASFKPETGQASGILEIPKINAELPIVEGTDANDL 95
:..||.|..| :.|..|.||||:||||||||:|:|||||||||||:||
RBAM_009460__ 47 VLEKNETKSAVLTQRKKEFHPETGEASGILEIPEIDAELPIVEGTDADDL 96
BSNT_01586___ 96 EKGVGHYKDSYYPDENGQIVLSGHRDTVFRRTGELEKGDRLRILLSYGEF 145
.||||||||||||.::|||||||||||||||||||:|||||.::||||.|
RBAM_009460__ 97 AKGVGHYKDSYYPGDHGQIVLSGHRDTVFRRTGELKKGDRLNVILSYGTF 146
BSNT_01586___ 146 TYEIVKTKIVDKDDTSIITLQHEKEELILTTCYPFSYVGNAPKRYIIYGK 195
:|:|.:||||.:||||:|||||::|||||||||||||:||||||||||..
RBAM_009460__ 147 SYKISRTKIVSRDDTSVITLQHKREELILTTCYPFSYIGNAPKRYIIYAD 196
BSNT_01586___ 196 RVT 198
.|
RBAM_009460__ 197 PV- 198
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