Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01583 and RBAM_009430

See DNA alignment / Visit BSNT_01583 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence pep-align/BSNT_01583.1.9828.seq
#    -bsequence pep-align/RBAM_009430___yhcP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01583-RBAM_009430___yhcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01583-RBAM_009430___yhcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01583
# 2: RBAM_009430___yhcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     179/342 (52.3%)
# Similarity:   233/342 (68.1%)
# Gaps:          51/342 (14.9%)
# Score: 944.0
# 
#
#=======================================

BSNT_01583         1 MRDGIGKRAASALFLCGVLVMLAVSSAIVSSAMYILSFPGQASGITKEQV     50
                         :||||...|.||||||:||||||:..|.|||||.....|..|||||
RBAM_009430__      1 ----MGKRAVFTLILCGVLVILAVSSAVSVSMMYILSGQNSRSVPTKEQV     46

BSNT_01583        51 TKHMKKESFKQADIYYTSKEKSLLPLTKETLEYAVSINQIMIGYSNQKPI    100
                     |:||.||.:|...||||:.||.||.|||.||::|..||||::||..:.|:
RBAM_009430__     47 TEHMDKEIYKHTAIYYTADEKPLLDLTKLTLDHAKRINQIIVGYKGEAPL     96

BSNT_01583       101 DIIFFPNEKQMEAYSGLLDVVGFYSEREQLIGLLPEEKKKLLEGDEVAVY    150
                     ::|||.:|.:||.||||.:|||||||:||::||||||||:||:.||:||:
RBAM_009430__     97 ELIFFSDEAEMEQYSGLKNVVGFYSEQEQMMGLLPEEKKQLLKKDELAVF    146

BSNT_01583       151 LYQRLLIHEYSHHAFHQKLKELETDPDEFPLWFHEGLSEWIANYELLIDP    200
                     :|::|:||||:|:|||||.::|.||...||||||||||||:|:|:::|||
RBAM_009430__    147 MYKQLIIHEYTHYAFHQKTRQLGTDTSVFPLWFHEGLSEWVAHYDVVIDP    196

BSNT_01583       201 ITFSVVPFDRLQTDRDWQEARAEYDTDVYLQSFYMIDELTDKYGKDIISE    250
                     |.|||||||:|.|||.||::|.||:|||||||||||.:||:.:|:.||..
RBAM_009430__    197 IAFSVVPFDQLTTDRKWQKSRMEYETDVYLQSFYMIKDLTETFGEGIILT    246

BSNT_01583       251 MIKETAKKGDFEKGFKSATKECLDQFEKDFKKKFEKNSAALDS-----IY    295
                     :|.:||:..||||||::||||.|.|||.||.|.:||...||:|     ::
RBAM_009430__    247 IINKTAETQDFEKGFEAATKESLKQFEHDFIKAYEKKKTALESQVSNAVF    296

BSNT_01583       296 PMPLLLVKSLLTHSAIPTCVGGICPWAGANEFRSCSISCASS    337
                                                               
RBAM_009430__    296 ------------------------------------------    296


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