Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01582 and RBAM_009420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence pep-align/BSNT_01582___yhcN.1.9828.seq
# -bsequence pep-align/RBAM_009420___yhcN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01582___yhcN-RBAM_009420___yhcN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01582___yhcN-RBAM_009420___yhcN.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01582___yhcN
# 2: RBAM_009420___yhcN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 116/193 (60.1%)
# Similarity: 142/193 (73.6%)
# Gaps: 16/193 ( 8.3%)
# Score: 575.5
#
#
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BSNT_01582___ 1 MLGKKQVLASVLLIPLLMT-GCGVADQGEGRRDNNDVRNVNYRNPANDDM 49
:.|||.:.|.||:|:|:| ||.:.:||||:|::|..:||||||..||..
RBAM_009420__ 1 -MIKKQAVISALLLPMLITAGCSMGNQGEGKRNDNHTQNVNYRNTPNDGA 49
BSNT_01582___ 50 RNVNNRDNVDNNVTDNVNNNNNRVNDDNNNDRKLEVADEAADKVTDLKEV 99
.|:| .||.:|. |.|:|::|.|.|||:|||||||||||
RBAM_009420__ 50 TNMN-----------TVNRHNQ--NTDHNDNRNLRVADKAADKVTDLKEV 86
BSNT_01582___ 100 KHADVIVAGNQAYVAVVLTNGNKGAVEDNLKKKIAKKVRSTDKNIDNVYV 149
|:|.||||||.||||||||||.|||:.::||.||..||:|.||::..|||
RBAM_009420__ 87 KNATVIVAGNSAYVAVVLTNGQKGAIANHLKNKITDKVKSADKHVRTVYV 136
BSNT_01582___ 150 SANPDFVERMQEYGKRIQKGDPIAGLFDEFIQTVQRVFPNPE- 191
|||||||||||.||||||.|.|::||||||.|.||||||||.
RBAM_009420__ 137 SANPDFVERMQGYGKRIQNGHPVSGLFDEFGQMVQRVFPNPNK 179
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