Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01543 and RBAM_009390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:13
# Commandline: needle
# -asequence pep-align/BSNT_01543___yhcK.1.9828.seq
# -bsequence pep-align/RBAM_009390___yhcK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01543___yhcK-RBAM_009390___yhcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01543___yhcK-RBAM_009390___yhcK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01543___yhcK
# 2: RBAM_009390___yhcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity: 219/359 (61.0%)
# Similarity: 276/359 (76.9%)
# Gaps: 0/359 ( 0.0%)
# Score: 1153.0
#
#
#=======================================
BSNT_01543___ 1 MLKELFVNFTILITFNYLFTHLFKERLVHKKDSISFQAVKGLACGLLGVI 50
||||||:|.|||||||||||.||||.|.||:|...||.:||..||||||.
RBAM_009390__ 1 MLKELFLNLTILITFNYLFTVLFKESLSHKEDRPMFQLLKGAVCGLLGVF 50
BSNT_01543___ 51 LMVFGFTYQHSIIDLRNIPIMIAALYGGWVSTATALAMITAGRLLITMNT 100
|:.|||:|..||||||||||:||||||||||||.|..:|.|||:||..|.
RBAM_009390__ 51 LIAFGFSYSDSIIDLRNIPIIIAALYGGWVSTAAAFFIIVAGRILINFNA 100
BSNT_01543___ 101 SALYSVIIICIAAIPSLIVSRRKKVQLKHAFYLLIITNSLISFSFYFLID 150
||:||:..:.:.||.|:.|.|.||...|:||.:|:.:|.:|:.:...|:.
RBAM_009390__ 101 SAIYSIAAVGMIAILSVAVFRGKKPNHKNAFVMLLFSNVIITLTLLLLMP 150
BSNT_01543___ 151 LHSYELHLYFWIISIAGGMLSLYIIDHETNAHLLFKQYKFQAHFDFLTGV 200
.......:|||:||..|||||||||.||.:|.||||||||||::|||||:
RBAM_009390__ 151 EQPAGALVYFWLISTLGGMLSLYIIKHEADARLLFKQYKFQANYDFLTGI 200
BSNT_01543___ 201 YNRRKFEETTKALYQQAADTPHFQFALIYMDIDHFKTINDQYGHHEGDQV 250
:|:|||||.::.||.:|:.:|..|.||||:||||||.|||||||:|||||
RBAM_009390__ 201 FNKRKFEEVSRVLYDRASQSPSSQLALIYLDIDHFKQINDQYGHYEGDQV 250
BSNT_01543___ 251 LKELGLRLKQSIRNTDPAARIGGEEFAVLLPNCSLDKAARIAERIRRTVS 300
|||||.||:..:.::||:|||||||||||:|||:..|...:||.||.|:.
RBAM_009390__ 251 LKELGARLRLLLSSSDPSARIGGEEFAVLMPNCTYTKGLHLAEEIRHTID 300
BSNT_01543___ 301 DAPIVLTNGEELSVTISLGAAHYPNNTEQPGSLPILADQMLYKAKETGRN 350
..||:||:|:.:.||:|||.||||.||..|.:||::||:||||||.:|||
RBAM_009390__ 301 ANPILLTSGDTIPVTVSLGIAHYPTNTSDPQTLPLIADRMLYKAKTSGRN 350
BSNT_01543___ 351 RVCFSEKKE 359
:||.:||||
RBAM_009390__ 351 QVCSTEKKE 359
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