Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01543 and RBAM_009390

See DNA alignment / Visit BSNT_01543 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence pep-align/BSNT_01543___yhcK.1.9828.seq
#    -bsequence pep-align/RBAM_009390___yhcK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01543___yhcK-RBAM_009390___yhcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01543___yhcK-RBAM_009390___yhcK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01543___yhcK
# 2: RBAM_009390___yhcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity:     219/359 (61.0%)
# Similarity:   276/359 (76.9%)
# Gaps:           0/359 ( 0.0%)
# Score: 1153.0
# 
#
#=======================================

BSNT_01543___      1 MLKELFVNFTILITFNYLFTHLFKERLVHKKDSISFQAVKGLACGLLGVI     50
                     ||||||:|.|||||||||||.||||.|.||:|...||.:||..||||||.
RBAM_009390__      1 MLKELFLNLTILITFNYLFTVLFKESLSHKEDRPMFQLLKGAVCGLLGVF     50

BSNT_01543___     51 LMVFGFTYQHSIIDLRNIPIMIAALYGGWVSTATALAMITAGRLLITMNT    100
                     |:.|||:|..||||||||||:||||||||||||.|..:|.|||:||..|.
RBAM_009390__     51 LIAFGFSYSDSIIDLRNIPIIIAALYGGWVSTAAAFFIIVAGRILINFNA    100

BSNT_01543___    101 SALYSVIIICIAAIPSLIVSRRKKVQLKHAFYLLIITNSLISFSFYFLID    150
                     ||:||:..:.:.||.|:.|.|.||...|:||.:|:.:|.:|:.:...|:.
RBAM_009390__    101 SAIYSIAAVGMIAILSVAVFRGKKPNHKNAFVMLLFSNVIITLTLLLLMP    150

BSNT_01543___    151 LHSYELHLYFWIISIAGGMLSLYIIDHETNAHLLFKQYKFQAHFDFLTGV    200
                     .......:|||:||..|||||||||.||.:|.||||||||||::|||||:
RBAM_009390__    151 EQPAGALVYFWLISTLGGMLSLYIIKHEADARLLFKQYKFQANYDFLTGI    200

BSNT_01543___    201 YNRRKFEETTKALYQQAADTPHFQFALIYMDIDHFKTINDQYGHHEGDQV    250
                     :|:|||||.::.||.:|:.:|..|.||||:||||||.|||||||:|||||
RBAM_009390__    201 FNKRKFEEVSRVLYDRASQSPSSQLALIYLDIDHFKQINDQYGHYEGDQV    250

BSNT_01543___    251 LKELGLRLKQSIRNTDPAARIGGEEFAVLLPNCSLDKAARIAERIRRTVS    300
                     |||||.||:..:.::||:|||||||||||:|||:..|...:||.||.|:.
RBAM_009390__    251 LKELGARLRLLLSSSDPSARIGGEEFAVLMPNCTYTKGLHLAEEIRHTID    300

BSNT_01543___    301 DAPIVLTNGEELSVTISLGAAHYPNNTEQPGSLPILADQMLYKAKETGRN    350
                     ..||:||:|:.:.||:|||.||||.||..|.:||::||:||||||.:|||
RBAM_009390__    301 ANPILLTSGDTIPVTVSLGIAHYPTNTSDPQTLPLIADRMLYKAKTSGRN    350

BSNT_01543___    351 RVCFSEKKE    359
                     :||.:||||
RBAM_009390__    351 QVCSTEKKE    359


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