Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01534 and RBAM_009320

See DNA alignment / Visit BSNT_01534 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence pep-align/BSNT_01534___yhcE.1.9828.seq
#    -bsequence pep-align/RBAM_009320___yhcE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01534___yhcE-RBAM_009320___yhcE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01534___yhcE-RBAM_009320___yhcE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01534___yhcE
# 2: RBAM_009320___yhcE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     141/255 (55.3%)
# Similarity:   181/255 (71.0%)
# Gaps:           2/255 ( 0.8%)
# Score: 757.5
# 
#
#=======================================

BSNT_01534___      1 MNSFLGLLKKDIKLSRMWLLLWICGIIFLLGTGHIIASRTKEPLVIFGFF     50
                     |.|||||||||.|:|.:||.:|:||:|......|:||:|.||||||||||
RBAM_009320__      1 MTSFLGLLKKDAKVSWIWLAVWLCGMICWAFAAHVIAARQKEPLVIFGFF     50

BSNT_01534___     51 VAVAFFLLFLSPVFVFYHLRKEGKSQLWLYNPNGGLWLFSSKLAASLLYQ    100
                     .|:.||...::|:|::|||.||||:||||||||||.:|.:|||.||||||
RBAM_009320__     51 TAMGFFQFLVAPLFMYYHLHKEGKNQLWLYNPNGGFYLLASKLTASLLYQ    100

BSNT_01534___    101 FVIQLALTAYGIWMYHMLSVKNLLEHQVDITSTVALLNMYGLISSLDMSV    150
                     .:.|||||.||||||.|||.|..|||.:.:..|:..||.|.||||..:||
RBAM_009320__    101 LIGQLALTGYGIWMYRMLSAKGALEHTIPLAGTLTGLNAYLLISSAYLSV    150

BSNT_01534___    151 TVIVFWTVFHSLRNWRGMRWAAMVLLVAVWLFFDEYIISPLVESQKHFWP    200
                     .|.|||||||||::...:||...::|..||.:.|:.||:|...||...||
RBAM_009320__    151 IVAVFWTVFHSLKHVPVLRWVICIVLAFVWTYIDDKIITPFTSSQHDLWP    200

BSNT_01534___    201 VTVYCNFDFHFHNV--WRLELKPIHLSVLGFPITLVITFLLLIMASKLLD    248
                     |.||.:||||:..:  |.:|||.:|:|:..|...:|:..|.|.:||.||:
RBAM_009320__    201 VKVYADFDFHYTKLTGWTVELKAVHISLFSFLAVIVLAALCLALASMLLN    250

BSNT_01534___    249 RKVEV    253
                     |||||
RBAM_009320__    251 RKVEV    255


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