Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01532 and RBAM_009310

See DNA alignment / Visit BSNT_01532 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_01532___yhcC.1.9828.seq
#    -bsequence pep-align/RBAM_009310___yhcC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01532___yhcC-RBAM_009310___yhcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01532___yhcC-RBAM_009310___yhcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01532___yhcC
# 2: RBAM_009310___yhcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      80/128 (62.5%)
# Similarity:    93/128 (72.7%)
# Gaps:           9/128 ( 7.0%)
# Score: 356.0
# 
#
#=======================================

BSNT_01532___      1 MAIIIAIIAAVIVIAALITFNVRNASPG----PEKQEATDRIAPPEEEKN     46
                     ||||||:||||||||.|||||||:.|.|    .||:||....|    |:.
RBAM_009310__      1 MAIIIAVIAAVIVIALLITFNVRSTSAGQDVKEEKREAIGTTA----EQP     46

BSNT_01532___     47 EAHYPAEARAAEHTPSVVKNDSPKEKRDTMGDDIYRQALQKFKHSDEVHA     96
                     |.|.|||.|:|||.|.|||::||:||::|||||:|||||||||.| |...
RBAM_009310__     47 EKHDPAEERSAEHAPVVVKSESPREKKNTMGDDVYRQALQKFKTS-ETDQ     95

BSNT_01532___     97 EEEVTEESDKMQDRSYRDALLSMKNKKK    124
                     |....:...||||.||||||||:|||||
RBAM_009310__     96 EPNDPDSGGKMQDSSYRDALLSLKNKKK    123


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