Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01531 and RBAM_009300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence pep-align/BSNT_01531___yhcB.1.9828.seq
# -bsequence pep-align/RBAM_009300___yhcB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01531___yhcB-RBAM_009300___yhcB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01531___yhcB-RBAM_009300___yhcB.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01531___yhcB
# 2: RBAM_009300___yhcB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 166/177 (93.8%)
# Similarity: 170/177 (96.0%)
# Gaps: 1/177 ( 0.6%)
# Score: 880.0
#
#
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BSNT_01531___ 1 MKIYVVYDSEGEHTKVLAEAIAEGARENGAAEVFIDHVDQADIRKLKDMD 50
|||||||||||||||.||||||||||||..|||.||||||||||||||||
RBAM_009300__ 1 MKIYVVYDSEGEHTKHLAEAIAEGARENAEAEVLIDHVDQADIRKLKDMD 50
BSNT_01531___ 51 AIIWGCPGHFGTISSGLKTWIDRLGYLWAEGELINKVGAVFCTTATTHGG 100
||||||||||||||||||.|||||||||||||||:|||||||||||||||
RBAM_009300__ 51 AIIWGCPGHFGTISSGLKAWIDRLGYLWAEGELIDKVGAVFCTTATTHGG 100
BSNT_01531___ 101 LEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDELM 150
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_009300__ 101 LEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDVLM 150
BSNT_01531___ 151 SEEGIQLGRALGRRVSQVTGNLTAGQ- 176
:|||:||||||||||||||||||||:
RBAM_009300__ 151 TEEGLQLGRALGRRVSQVTGNLTAGRQ 177
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