Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01531 and RBAM_009300

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_01531___yhcB.1.9828.seq
#    -bsequence pep-align/RBAM_009300___yhcB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01531___yhcB-RBAM_009300___yhcB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01531___yhcB-RBAM_009300___yhcB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01531___yhcB
# 2: RBAM_009300___yhcB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     166/177 (93.8%)
# Similarity:   170/177 (96.0%)
# Gaps:           1/177 ( 0.6%)
# Score: 880.0
# 
#
#=======================================

BSNT_01531___      1 MKIYVVYDSEGEHTKVLAEAIAEGARENGAAEVFIDHVDQADIRKLKDMD     50
                     |||||||||||||||.||||||||||||..|||.||||||||||||||||
RBAM_009300__      1 MKIYVVYDSEGEHTKHLAEAIAEGARENAEAEVLIDHVDQADIRKLKDMD     50

BSNT_01531___     51 AIIWGCPGHFGTISSGLKTWIDRLGYLWAEGELINKVGAVFCTTATTHGG    100
                     ||||||||||||||||||.|||||||||||||||:|||||||||||||||
RBAM_009300__     51 AIIWGCPGHFGTISSGLKAWIDRLGYLWAEGELIDKVGAVFCTTATTHGG    100

BSNT_01531___    101 LEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDELM    150
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_009300__    101 LEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDVLM    150

BSNT_01531___    151 SEEGIQLGRALGRRVSQVTGNLTAGQ-    176
                     :|||:||||||||||||||||||||: 
RBAM_009300__    151 TEEGLQLGRALGRRVSQVTGNLTAGRQ    177


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