Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01518 and RBAM_009230

See DNA alignment / Visit BSNT_01518 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence pep-align/BSNT_01518___yhbE.1.9828.seq
#    -bsequence pep-align/RBAM_009230___yhbE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01518___yhbE-RBAM_009230___yhbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01518___yhbE-RBAM_009230___yhbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01518___yhbE
# 2: RBAM_009230___yhbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     165/237 (69.6%)
# Similarity:   193/237 (81.4%)
# Gaps:           0/237 ( 0.0%)
# Score: 845.0
# 
#
#=======================================

BSNT_01518___      1 MDVVEKLVINGSGSSKGGTFQSVEINGSGTVAGDVECDTFSFNGNGKVDG     50
                     |:|.:||:||||||||||.|.:|||||||||:|||||.:|.|||:||.||
RBAM_009230__      1 MEVTDKLIINGSGSSKGGRFHTVEINGSGTVSGDVECASFLFNGSGKTDG     50

BSNT_01518___     51 SVKAKAVTISGSGKIHGDVEAESIRMNGTGFIQGEVSAKQLKIAGSSTFG    100
                     .||.:.:||||||||.|..||||||:||||.|:|:|..::|.:||.|:||
RBAM_009230__     51 HVKTQTLTISGSGKISGSAEAESIRINGTGVIKGDVKTERLNVAGFSSFG    100

BSNT_01518___    101 GTVKADGIDISGKAVMEADCETETFQSEGKCKISGLLNADQVIIKLSAGE    150
                     |.||||.|.|||||.:|.|||||||:|||||||.||||||:|.|||:|||
RBAM_009230__    101 GGVKADDIFISGKAGIEGDCETETFRSEGKCKIGGLLNADEVSIKLTAGE    150

BSNT_01518___    151 SYVREIGCRHLQVTCRKGMLTLLRLMPQPVLTAELIEGDVIELTNTKAKT    200
                     |:|:|||||||:|..||.:||..:|||.|||||||||||:|||.:|.|||
RBAM_009230__    151 SHVKEIGCRHLKVMSRKSVLTRFKLMPAPVLTAELIEGDIIELADTNAKT    200

BSNT_01518___    201 VRGNKVVIGPDCQIETVEYSGDYTCDPSASVETSTKL    237
                     ||||.|.||..|.|.|||||||:||||||.|....|.
RBAM_009230__    201 VRGNHVRIGAGCTIGTVEYSGDFTCDPSALVNKVVKR    237


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