Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01518 and RBAM_009230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01518___yhbE.1.9828.seq
# -bsequence dna-align/RBAM_009230___yhbE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01518___yhbE-RBAM_009230___yhbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01518___yhbE-RBAM_009230___yhbE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01518___yhbE
# 2: RBAM_009230___yhbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 743
# Identity: 499/743 (67.2%)
# Similarity: 499/743 (67.2%)
# Gaps: 58/743 ( 7.8%)
# Score: 1621.5
#
#
#=======================================
BSNT_01518___ 1 ATGGATGTAGTGGAAAAGCTGGTGATAAACGGATCAGGAAGTTCAAAGGG 50
|||||.|||...||.||..|..|.||.|||||.||||||||||||||.||
RBAM_009230__ 1 ATGGAAGTAACAGATAAATTAATCATCAACGGTTCAGGAAGTTCAAAAGG 50
BSNT_01518___ 51 AGGAACATTTCAATCTGTTGAGATTAATGGCAGCGGGACAGTGGCCGGGG 100
|||....|||||..|.||.|||||.||.||.|||||.||.|||.|.||.|
RBAM_009230__ 51 AGGCCGTTTTCATACAGTGGAGATCAACGGAAGCGGCACGGTGTCAGGTG 100
BSNT_01518___ 101 ACGTGGAGTGTGACA-CTTTTTCTTTTAATGGAAACGGAAAAGTCGACGG 149
|.||||||||.|..| |||||| .|||||.||.|.|||||||...|||||
RBAM_009230__ 101 ATGTGGAGTGCGCGAGCTTTTT-GTTTAACGGCAGCGGAAAAACAGACGG 149
BSNT_01518___ 150 -CAGCGTCAAAGCGAAAGCGGTAACCATCAGCGGTTCAGGAAAGATACAT 198
|| .|||||..||.||.||.|.||.|||||||||||.||.||.||
RBAM_009230__ 150 ACA-TGTCAAGACGCAAACGCTGACGATCAGCGGTTCGGGGAAAAT---- 194
BSNT_01518___ 199 GGAGACGTT-----------GAAGCAGAATCTATCCGGATGAATGGCACT 237
|| |||||.|||||.|||||.||.||.||.||.
RBAM_009230__ 195 -------TTCCGGCAGTGCCGAAGCTGAATCCATCCGTATCAACGGAACG 237
BSNT_01518___ 238 GGTTTTATTCAAGGAGAGGTATCTGCAAAA-----CAATTGAAAATCGCT 282
|||.|.|||.||||.||.|| ||||| |...||||..||||.
RBAM_009230__ 238 GGTGTCATTAAAGGTGATGT-----CAAAACGGAGCGGCTGAACGTCGCG 282
BSNT_01518___ 283 GGATCATCAACATTTGGCGGCACTGTCAAGGCTGATGGCATTGACATTAG 332
||||..|||.|.||.||||||..|||.||.|||||||..|||..|||...
RBAM_009230__ 283 GGATTTTCATCTTTCGGCGGCGGTGTGAAAGCTGATGATATTTTCATATC 332
BSNT_01518___ 333 CGGAAAAGCTGTCATGGAAGCAGATTGTGAAACAGAAACCTTTCAATCAG 382
|||.|||||.|..||.||||..|||||.||.|||||.||.||.|..||.|
RBAM_009230__ 333 CGGGAAAGCCGGGATTGAAGGCGATTGCGAGACAGAGACGTTCCGTTCGG 382
BSNT_01518___ 383 AAGGGAAATGCAAAATCAGCGGGCTTTTAAATGCAGACCAGGTGATCATT 432
||||.||||||||.|||.||||.||..|.|||||.||..|.||.|..|||
RBAM_009230__ 383 AAGGCAAATGCAAGATCGGCGGCCTGCTGAATGCCGATGAAGTCAGTATT 432
BSNT_01518___ 433 AAGCTTTCTGCAGGGGAAAGCTATGTGCGGGAGATCGGCTGCCGCCATCT 482
|||||..|.||.||.||||||.|||||...||||||||||||||||||.|
RBAM_009230__ 433 AAGCTGACGGCGGGAGAAAGCCATGTGAAAGAGATCGGCTGCCGCCATTT 482
BSNT_01518___ 483 TCAAGTGACCTGCAGAAAAGGAATGCTGACATTGC---TCAGATTAATGC 529
..||||||...|||||||..|..||||.|| || |.|.|.|.||||
RBAM_009230__ 483 GAAAGTGATGAGCAGAAAGAGCGTGCTTAC---GCGTTTTAAACTGATGC 529
BSNT_01518___ 530 CGCAGCCTGTTCTAACAGCAGAGCTGATCGAAGGTGACGTGATTGAATTG 579
||...||.||.||.|||||.||||||||.|||||||||.|.|||||||||
RBAM_009230__ 530 CGGCCCCGGTGCTGACAGCGGAGCTGATTGAAGGTGACATCATTGAATTG 579
BSNT_01518___ 580 ACAAATACAAAGGCGAAAACCGTGCGCGGAAATAAAGTGGTCATCGGCCC 629
.|..|.||.||.|||||.||.||.|||||||||.|.|||...||||||.|
RBAM_009230__ 580 GCGGACACGAACGCGAAGACAGTCCGCGGAAATCATGTGCGGATCGGCGC 629
BSNT_01518___ 630 GGATTGCCAGATTGAAACCGTCGAATACAGTGGGGACTATACCTGTGATC 679
.|..|||...||||..||.||.||||||||.||.||.|.|||.|||||||
RBAM_009230__ 630 AGGCTGCACCATTGGGACTGTGGAATACAGCGGCGATTTTACATGTGATC 679
BSNT_01518___ 680 CAAGCGCGTCGGTTGAAACATCCACAAAGTTGTAA-------- 714
|...|||.|.|||| .|||||||.||.|
RBAM_009230__ 680 CTTCCGCTTTGGTT--------AACAAAGTCGTGAAACGATAG 714
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