Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01509 and RBAM_009160

See DNA alignment / Visit BSNT_01509 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence pep-align/BSNT_01509___ygaO.1.9828.seq
#    -bsequence pep-align/RBAM_009160___ygaO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01509___ygaO-RBAM_009160___ygaO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01509___ygaO-RBAM_009160___ygaO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01509___ygaO
# 2: RBAM_009160___ygaO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     100/157 (63.7%)
# Similarity:   127/157 (80.9%)
# Gaps:           2/157 ( 1.3%)
# Score: 542.0
# 
#
#=======================================

BSNT_01509___      1 MSMKTKAAFHLVLFGLACWALISYFEASEDIASFFGTKSGGMVFDLNLTP     50
                     ||:|.||.|||.|:|||||.|||:.||:..||.||.|:..|. |:||:||
RBAM_009160__      1 MSLKRKACFHLALYGLACWTLISFMEAAPRIAQFFQTEGSGS-FELNITP     49

BSNT_01509___     51 FILFVAASAVYLSLQKKSRPARKQLLLPDEFEEQDEREQMMTAKACRASY    100
                     |:||...:|:|:..:||.|..:|..|:|||||||||||:||||||||:||
RBAM_009160__     50 FLLFTVCAALYIYAEKKKRNGKKHRLVPDEFEEQDERERMMTAKACRSSY     99

BSNT_01509___    101 IAVYFSLPAAAVLLIFYPLFQSRIPFFPIIIVFIIMIIQHLSYVISFKKN    150
                     ||||||||||||||:||||.|..:|||||:::||:|:||||:||.:|.|:
RBAM_009160__    100 IAVYFSLPAAAVLLLFYPLIQPHLPFFPILLIFILMMIQHLAYVFTFHKH    149

BSNT_01509___    151 EKNSGAL    157
                     .||||: 
RBAM_009160__    150 GKNSGS-    155


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