Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01504 and RBAM_009130

See DNA alignment / Visit BSNT_01504 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_01504___ssuC.1.9828.seq
#    -bsequence pep-align/RBAM_009130___ssuC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01504___ssuC-RBAM_009130___ssuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01504___ssuC-RBAM_009130___ssuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01504___ssuC
# 2: RBAM_009130___ssuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     219/280 (78.2%)
# Similarity:   247/280 (88.2%)
# Gaps:           7/280 ( 2.5%)
# Score: 1101.5
# 
#
#=======================================

BSNT_01504___      1 MMKAE---AAGSLPKTNAEAVRKKPGRK-RYGFMKGLLLPAVIIAIWQVI     46
                      ||||   |||::.::..:|:  ...|| .|.:|||::|||.:||:||||
RBAM_009130__      1 -MKAEASTAAGAISQSEKKAL--ATSRKYSYQWMKGIVLPAAVIAVWQVI     47

BSNT_01504___     47 GGLGIVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAG     96
                     ..|||||.||||:||.|:.||:||:|||||:|||:||:||||.|||||||
RBAM_009130__     48 ASLGIVSTTVLPSPVVILQTFQELLLSGELWGHLEISLYRAAAGFLLGAG     97

BSNT_01504___     97 LGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKI    146
                     |||:.|:|.|||||||.|||||||||||||||||||||||||||||.|||
RBAM_009130__     98 LGLVFGLLVGFSKRTEAYLDPSLQMLRTVPHLAVTPLFILWFGFDETSKI    147

BSNT_01504___    147 LLIALGAFFPVYINTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAAL    196
                     ||||||||||||||||.|||.||||||:|||||||.|:||::|:||||:|
RBAM_009130__    148 LLIALGAFFPVYINTFLGIRSVDAKLFDVARVLEFNWYQQMTKLILPASL    197

BSNT_01504___    197 PNILLGIRLSLGIAWLGLVVAELMGSSAGVGYMIMDARQFSQTNKVFAGI    246
                     |||||||||||||||||||||||||||.|||||||||||||||||||.||
RBAM_009130__    198 PNILLGIRLSLGIAWLGLVVAELMGSSEGVGYMIMDARQFSQTNKVFVGI    247

BSNT_01504___    247 IIFAVVGKLTDSFVRLLERKLLKWRNSYEG    276
                     ||||.||||||:.||:||||||||||||||
RBAM_009130__    248 IIFAAVGKLTDALVRMLERKLLKWRNSYEG    277


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