Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01502 and RBAM_009120
See
DNA alignment /
Visit
BSNT_01502 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence pep-align/BSNT_01502___ssuA.1.9828.seq
# -bsequence pep-align/RBAM_009120___ssuA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01502___ssuA-RBAM_009120___ssuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01502___ssuA-RBAM_009120___ssuA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01502___ssuA
# 2: RBAM_009120___ssuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 269/333 (80.8%)
# Similarity: 293/333 (88.0%)
# Gaps: 5/333 ( 1.5%)
# Score: 1365.5
#
#
#=======================================
BSNT_01502___ 1 MKKGLIVLVAVIFLLAGCGANGASGDHKQLKEIRIGIQQSLSPLLIAKEK 50
|||.:|:|.|.:.:.|||.|:...|..|.:||||||||||||||||||||
RBAM_009120__ 1 MKKIIILLAAAVMMSAGCSADRTGGSGKTVKEIRIGIQQSLSPLLIAKEK 50
BSNT_01502___ 51 GWFEDAFEKEGIKVKWVEFQSGPPQFEGLAADKLDFSQVGNSPVIAGQAA 100
||||:||:|:|||||||||||||||||||||||||||||||||||:||||
RBAM_009120__ 51 GWFEEAFKKDGIKVKWVEFQSGPPQFEGLAADKLDFSQVGNSPVISGQAA 100
BSNT_01502___ 101 GIDFKEIGLSQDGLKANGILVNRNSGIQDVKGLKGKKIAVAKGSSGFDFL 150
||||||||||||||||||||||:.||||.:|.||||||||||||||||||
RBAM_009120__ 101 GIDFKEIGLSQDGLKANGILVNKGSGIQSLKELKGKKIAVAKGSSGFDFL 150
BSNT_01502___ 151 YKALDQVGLSANDVTIIQLQPDEAASAFENGSVDAWSIWEPYLSLETMKH 200
|||||:.||||:||||||||||||.|||||.|||||||||||||:||::|
RBAM_009120__ 151 YKALDKAGLSADDVTIIQLQPDEAVSAFENKSVDAWSIWEPYLSIETLQH 200
BSNT_01502___ 201 GAKILVNGESTDLYSPGFTLVRTKFSEEHPDEVVRFLKVFNKAVVWQKEH 250
||:||.|||||||||||||||||.||:|||||||||||||||||.|||||
RBAM_009120__ 201 GAEILANGESTDLYSPGFTLVRTGFSKEHPDEVVRFLKVFNKAVAWQKEH 250
BSNT_01502___ 251 LGEAADLYSDIKDLDKKVVENVLKNTEPLNEVISDDIVKAQQETADFQFR 300
..||..||:.||.||.|||.|||.|||||||.|:||||||||||||||::
RBAM_009120__ 251 KDEAVSLYAKIKHLDPKVVRNVLNNTEPLNEPINDDIVKAQQETADFQYQ 300
BSNT_01502___ 301 TKAIDKKIDVKDVVDNSFIKKALKEHSSGGDQ- 332
||||.|||.||||||||||||||:. ||.
RBAM_009120__ 301 TKAIHKKIQVKDVVDNSFIKKALET----GDGK 329
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.