Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01501 and RBAM_009110

See DNA alignment / Visit BSNT_01501 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_01501___ssuB.1.9828.seq
#    -bsequence pep-align/RBAM_009110___ssuB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01501___ssuB-RBAM_009110___ssuB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01501___ssuB-RBAM_009110___ssuB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01501___ssuB
# 2: RBAM_009110___ssuB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     208/269 (77.3%)
# Similarity:   238/269 (88.5%)
# Gaps:          14/269 ( 5.2%)
# Score: 1092.0
# 
#
#=======================================

BSNT_01501___      1 --------------MAVTISIKEKAFVQEGRKNTVLENIELSIAPGEFLT     36
                                   |||||||:||||..||||..||.:||||||.|||||
RBAM_009110__      1 MFFDRTRQKERGRQMAVTISIQEKAFEHEGRKTPVLNDIELSIASGEFLT     50

BSNT_01501___     37 LIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRL     86
                     :|||||||||||||:|||||::|.|||.||||:|:.|||:||||||||||
RBAM_009110__     51 VIGPSGCGKSTLLKLIAGLDTDYKGSVTINGRNVSGPGIRQGFIFQEHRL    100

BSNT_01501___     87 FPWLTVEQNIAADLNLNDPKVKQKVDELIEIVRLKGSEKAYPRELSGGMS    136
                     ||||||:||||||||:|||.:::|||:|||:|||:|:|.|||||||||||
RBAM_009110__    101 FPWLTVKQNIAADLNMNDPAIRKKVDDLIEVVRLQGAENAYPRELSGGMS    150

BSNT_01501___    137 QRVAIARALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRRKKTTMIL    186
                     ||||||||||||||||||||||||||||||||||:|||||||.|||||||
RBAM_009110__    151 QRVAIARALLREPEVLLLDEPFGALDAFTRKHLQEVLLDIWREKKTTMIL    200

BSNT_01501___    187 VTHDIDESVYLGNELAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQR    236
                     ||||||||||||::||||:||||::|.||||.|.:|||||:.||||:||:
RBAM_009110__    201 VTHDIDESVYLGDKLAILRAKPGRLHSLMPIQLPHPRNRTSADFQAVRQK    250

BSNT_01501___    237 VLSEFEKTEDLEYAEGSGI    255
                     |||||||||||.:|:||||
RBAM_009110__    251 VLSEFEKTEDLRFADGSGI    269


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