Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01448 and RBAM_008830

See DNA alignment / Visit BSNT_01448 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_01448___ygzB.1.9828.seq
#    -bsequence pep-align/RBAM_008830___ygzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01448___ygzB-RBAM_008830___ygzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01448___ygzB-RBAM_008830___ygzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01448___ygzB
# 2: RBAM_008830___ygzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:     104/117 (88.9%)
# Similarity:   111/117 (94.9%)
# Gaps:           0/117 ( 0.0%)
# Score: 546.0
# 
#
#=======================================

BSNT_01448___      1 MAKYSSKINKIRTFALSLVFVGFIIMYIGIFFKESVLLSSLFMILGLLSI     50
                     |||||||||||||||||||||||||||||:|||:||||:|||||||||||
RBAM_008830__      1 MAKYSSKINKIRTFALSLVFVGFIIMYIGLFFKQSVLLASLFMILGLLSI     50

BSNT_01448___     51 GLSTVVYFWIGMLSTKAVRVICPGCDKETKVLGRVDMCMHCREPLTLDKG    100
                     ||||.|||||||||||||||:||.|:||||:|||||||||||||||||||
RBAM_008830__     51 GLSTAVYFWIGMLSTKAVRVMCPACEKETKILGRVDMCMHCREPLTLDKG    100

BSNT_01448___    101 LEGKEFDESYNKKKMSK    117
                     ||||.||||||:|...|
RBAM_008830__    101 LEGKAFDESYNRKNSVK    117


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