Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01448 and RBAM_008830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_01448___ygzB.1.9828.seq
# -bsequence dna-align/RBAM_008830___ygzB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01448___ygzB-RBAM_008830___ygzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01448___ygzB-RBAM_008830___ygzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01448___ygzB
# 2: RBAM_008830___ygzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 355
# Identity: 293/355 (82.5%)
# Similarity: 293/355 (82.5%)
# Gaps: 2/355 ( 0.6%)
# Score: 1205.0
#
#
#=======================================
BSNT_01448___ 1 ATGGCGAAATACTCCAGCAAAATTAATAAAATCAGAACATTTGCGTTAAG 50
||||||||||||||.||||||||||||||.||||||||.|||||||||||
RBAM_008830__ 1 ATGGCGAAATACTCAAGCAAAATTAATAAGATCAGAACGTTTGCGTTAAG 50
BSNT_01448___ 51 TTTGGTTTTCGTTGGGTTTATCATTATGTACATCGGGATCTTTTTCAAAG 100
|||||||||||||||||||||||||||||||||||||.|.||.|||||..
RBAM_008830__ 51 TTTGGTTTTCGTTGGGTTTATCATTATGTACATCGGGCTGTTCTTCAAGC 100
BSNT_01448___ 101 AGTCAGTTTTGCTTTCTAGTTTGTTTATGATACTTGGGCTTTTATCCATC 150
||||.|||||||||.|.||.|||||||||||.||.||.||..|.||.|||
RBAM_008830__ 101 AGTCTGTTTTGCTTGCCAGCTTGTTTATGATTCTCGGCCTGCTGTCGATC 150
BSNT_01448___ 151 GGTCTCAGCACGGTAGTTTACTTTTGGATCGGAATGCTTTCGACTAAAGC 200
||.||||||||.|..|||||.|||||||||||.|||||.||.||.|||||
RBAM_008830__ 151 GGGCTCAGCACCGCCGTTTATTTTTGGATCGGCATGCTGTCCACAAAAGC 200
BSNT_01448___ 201 GGTTCGCGTCATTTGTCCAGGCTGTGATAAAGAGACAAAGGTTTTAGGAA 250
|||.||.||.||.||.||.|..||.||.|||||.||.|||.||.|.||.|
RBAM_008830__ 201 GGTCCGGGTGATGTGCCCCGCTTGCGAGAAAGAAACGAAGATTCTGGGCA 250
BSNT_01448___ 251 GAGTCGATATGTGCATGCATTGCCGAGAGCCGCTGACTTTAGATAAGGGA 300
||||.||||||||||||||||||.||||||||||.||.||.|||||.|||
RBAM_008830__ 251 GAGTGGATATGTGCATGCATTGCAGAGAGCCGCTCACATTGGATAAAGGA 300
BSNT_01448___ 301 TTAGAAGGAAAAGAATTTGATGAGTCTTATAATA-AAAAGAAAATGTCGA 349
||.|||||.||||..||.||||||||||||||.| ||||.|.|.||| .|
RBAM_008830__ 301 TTGGAAGGCAAAGCGTTCGATGAGTCTTATAACAGAAAAAACAGTGT-AA 349
BSNT_01448___ 350 AATAA 354
|||||
RBAM_008830__ 350 AATAA 354
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