Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01448 and RBAM_008830

See Amino acid alignment / Visit BSNT_01448 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence dna-align/BSNT_01448___ygzB.1.9828.seq
#    -bsequence dna-align/RBAM_008830___ygzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01448___ygzB-RBAM_008830___ygzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01448___ygzB-RBAM_008830___ygzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01448___ygzB
# 2: RBAM_008830___ygzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 355
# Identity:     293/355 (82.5%)
# Similarity:   293/355 (82.5%)
# Gaps:           2/355 ( 0.6%)
# Score: 1205.0
# 
#
#=======================================

BSNT_01448___      1 ATGGCGAAATACTCCAGCAAAATTAATAAAATCAGAACATTTGCGTTAAG     50
                     ||||||||||||||.||||||||||||||.||||||||.|||||||||||
RBAM_008830__      1 ATGGCGAAATACTCAAGCAAAATTAATAAGATCAGAACGTTTGCGTTAAG     50

BSNT_01448___     51 TTTGGTTTTCGTTGGGTTTATCATTATGTACATCGGGATCTTTTTCAAAG    100
                     |||||||||||||||||||||||||||||||||||||.|.||.|||||..
RBAM_008830__     51 TTTGGTTTTCGTTGGGTTTATCATTATGTACATCGGGCTGTTCTTCAAGC    100

BSNT_01448___    101 AGTCAGTTTTGCTTTCTAGTTTGTTTATGATACTTGGGCTTTTATCCATC    150
                     ||||.|||||||||.|.||.|||||||||||.||.||.||..|.||.|||
RBAM_008830__    101 AGTCTGTTTTGCTTGCCAGCTTGTTTATGATTCTCGGCCTGCTGTCGATC    150

BSNT_01448___    151 GGTCTCAGCACGGTAGTTTACTTTTGGATCGGAATGCTTTCGACTAAAGC    200
                     ||.||||||||.|..|||||.|||||||||||.|||||.||.||.|||||
RBAM_008830__    151 GGGCTCAGCACCGCCGTTTATTTTTGGATCGGCATGCTGTCCACAAAAGC    200

BSNT_01448___    201 GGTTCGCGTCATTTGTCCAGGCTGTGATAAAGAGACAAAGGTTTTAGGAA    250
                     |||.||.||.||.||.||.|..||.||.|||||.||.|||.||.|.||.|
RBAM_008830__    201 GGTCCGGGTGATGTGCCCCGCTTGCGAGAAAGAAACGAAGATTCTGGGCA    250

BSNT_01448___    251 GAGTCGATATGTGCATGCATTGCCGAGAGCCGCTGACTTTAGATAAGGGA    300
                     ||||.||||||||||||||||||.||||||||||.||.||.|||||.|||
RBAM_008830__    251 GAGTGGATATGTGCATGCATTGCAGAGAGCCGCTCACATTGGATAAAGGA    300

BSNT_01448___    301 TTAGAAGGAAAAGAATTTGATGAGTCTTATAATA-AAAAGAAAATGTCGA    349
                     ||.|||||.||||..||.||||||||||||||.| ||||.|.|.||| .|
RBAM_008830__    301 TTGGAAGGCAAAGCGTTCGATGAGTCTTATAACAGAAAAAACAGTGT-AA    349

BSNT_01448___    350 AATAA    354
                     |||||
RBAM_008830__    350 AATAA    354


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