Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01442 and RBAM_008780

See DNA alignment / Visit BSNT_01442 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence pep-align/BSNT_01442___ygaD.1.9828.seq
#    -bsequence pep-align/RBAM_008780___ygaD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01442___ygaD-RBAM_008780___ygaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01442___ygaD-RBAM_008780___ygaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01442___ygaD
# 2: RBAM_008780___ygaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity:     518/580 (89.3%)
# Similarity:   553/580 (95.3%)
# Gaps:           0/580 ( 0.0%)
# Score: 2671.0
# 
#
#=======================================

BSNT_01442___      1 MGVMKRYMQFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGG     50
                     |||::||||||||||||||:||||||:||||||||||||||||||||||.
RBAM_008780__      1 MGVIRRYMQFVKPYKKQIFITVLIGIIKFSIPLALPLLLKYVVDDIIQGS     50

BSNT_01442___     51 GTASDKTTSLFTIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAK    100
                     ||||.||:||||||.|||.||||||||||||||||||||.|:||||||..
RBAM_008780__     51 GTASAKTSSLFTIMGIMFVLFLILRPPVEYYRQYFAQWTGSRVLYDIRGV    100

BSNT_01442___    101 LFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTI    150
                     |||||||||||||||||||||||||||||||||||||||||||||||:|:
RBAM_008780__    101 LFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMMTV    150

BSNT_01442___    151 LIVISIMLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQV    200
                     ||||.||.||||||||||::||||||||||||||||||||||||||||||
RBAM_008780__    151 LIVICIMFTLDVKLTLISVILFPLYGISVKYFYGRLRKLTRERSQALAQV    200

BSNT_01442___    201 QGHLHERIQGMPVIRSFAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFA    250
                     |||||||:|||||||||||||:|||.|:||||||||:|||||||||||||
RBAM_008780__    201 QGHLHERVQGMPVIRSFAIEDYEQANFDEKNGHFLDRAIRHTNWNAKTFA    250

BSNT_01442___    251 VVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLIN    300
                     |||||||||||:|||.||||||||||||||||||||||||||||||||||
RBAM_008780__    251 VVNTITDLAPLLVIAFAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLIN    300

BSNT_01442___    301 SSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQNVSFQY    350
                     ||||||||||||||:||||||||||||||||:|||.|:|.|||:||||:|
RBAM_008780__    301 SSTTLTQSIASMDRIFEFIDEPYELTDKPNAVKADGIKGEVEFRNVSFRY    350

BSNT_01442___    351 EKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLL    400
                     |:.||.||.||||||.:|||||||||||||||||||||||||||:.|.||
RBAM_008780__    351 EEGKETILQDVSLKVTKGETVALVGMSGGGKSTLVSLIPRFYDVSGGSLL    400

BSNT_01442___    401 IDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIE    450
                     |||||||||||||||||||||||||||||||||||||||||.|:|:|::.
RBAM_008780__    401 IDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPGASLDEVVA    450

BSNT_01442___    451 AAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLL    500
                     ||||||||||||:|||||||:|||||||||||||||||||||||||||||
RBAM_008780__    451 AAKAANAHEFIMNFPEGYETKVGERGVKLSGGQKQRISIARVFLKNPPLL    500

BSNT_01442___    501 ILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVME    550
                     |||||||||||||||||||||:||||:||||:||||||||||||||||||
RBAM_008780__    501 ILDEATSALDLESEHYIQEAMEKLAKNRTTFIVAHRLSTITHADKIVVME    550

BSNT_01442___    551 NGTIIEIGTHDELMDYESQYKHLFTIQNLN    580
                     ||.|:|.|||:|||....||:|||||||||
RBAM_008780__    551 NGAIVETGTHEELMAQGGQYRHLFTIQNLN    580


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