Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01441 and RBAM_008770
See
DNA alignment /
Visit
BSNT_01441 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence pep-align/BSNT_01441___ygaC.1.9828.seq
# -bsequence pep-align/RBAM_008770___ygaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01441___ygaC-RBAM_008770___ygaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01441___ygaC-RBAM_008770___ygaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01441___ygaC
# 2: RBAM_008770___ygaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 176
# Identity: 167/176 (94.9%)
# Similarity: 176/176 (100.0%)
# Gaps: 0/176 ( 0.0%)
# Score: 958.0
#
#
#=======================================
BSNT_01441___ 1 MGYPKEGETIQIHSYKHNGLIHRIWNETTILKSTEMCVIGANDRTMVTES 50
||||||||||||||||||||:||||||||||||||:|:||||||||||||
RBAM_008770__ 1 MGYPKEGETIQIHSYKHNGLLHRIWNETTILKSTELCIIGANDRTMVTES 50
BSNT_01441___ 51 DGRTWITREPAICYFHARQWFNVIGMLREDGVHYYCNISSPFAYDGEAIK 100
|||||:||||||||||||||||||||||:|||||||||||||||||||||
RBAM_008770__ 51 DGRTWVTREPAICYFHARQWFNVIGMLRDDGVHYYCNISSPFAYDGEAIK 100
BSNT_01441___ 101 YIDYDLDVKVFPDMTYNILDEDEYDDHRKAMNYPKEIDSILRDYLNTLLH 150
|||||||||||||||||||||||||||||:|||||||||||::|||||||
RBAM_008770__ 101 YIDYDLDVKVFPDMTYNILDEDEYDDHRKSMNYPKEIDSILKEYLNTLLH 150
BSNT_01441___ 151 WIHQRQGPFAPEFVDMWYERYLRYTK 176
|||||:||||||||||||||||||||
RBAM_008770__ 151 WIHQRKGPFAPEFVDMWYERYLRYTK 176
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.