Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01441 and RBAM_008770

See Amino acid alignment / Visit BSNT_01441 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence dna-align/BSNT_01441___ygaC.1.9828.seq
#    -bsequence dna-align/RBAM_008770___ygaC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01441___ygaC-RBAM_008770___ygaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01441___ygaC-RBAM_008770___ygaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01441___ygaC
# 2: RBAM_008770___ygaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 532
# Identity:     444/532 (83.5%)
# Similarity:   444/532 (83.5%)
# Gaps:           2/532 ( 0.4%)
# Score: 1856.0
# 
#
#=======================================

BSNT_01441___      1 ATGGGCTATCCCAAGGAAGGAGAAACCATTCAAATTCACAGCTATAAGCA     50
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_008770__      1 ATGGGATATCCCAAGGAAGGAGAAACCATTCAAATTCACAGCTATAAGCA     50

BSNT_01441___     51 CAACGGGCTGATTCATAGAATTTGGAATGAGACAACAATCTTAAAAAGTA    100
                     .|||||||||.|||||.|||||||||||||.||.||.||.||||||||||
RBAM_008770__     51 TAACGGGCTGCTTCATCGAATTTGGAATGAAACGACGATTTTAAAAAGTA    100

BSNT_01441___    101 CAGAAATGTGTGTCATCGGAGCCAATGACCGGACGATGGTAACCGAATCA    150
                     |.|||.|||||.|||||||||||||.||||||||.|||||.||.|||||.
RBAM_008770__    101 CGGAATTGTGTATCATCGGAGCCAACGACCGGACAATGGTGACGGAATCC    150

BSNT_01441___    151 GACGGCCGGACATGGATAACCAGAGAGCCCGCAATCTGTTATTTTCACGC    200
                     |||||.|||||.|||.|.||.|||||.||.||.|||||.||.|||||.||
RBAM_008770__    151 GACGGACGGACGTGGGTGACGAGAGAACCGGCGATCTGCTACTTTCATGC    200

BSNT_01441___    201 AAGACAATGGTTTAATGTCATCGGGATGCTGAGGGAAGACGGGGTTCATT    250
                     ..|.||.||||||||.||||||||.||||||||.||.||||||||.||.|
RBAM_008770__    201 CCGTCAGTGGTTTAACGTCATCGGAATGCTGAGAGATGACGGGGTACACT    250

BSNT_01441___    251 ATTATTGCAACATCAGTTCTCCGTTTGCCTATGATGGCGAAGCAATTAAA    300
                     ||||||||||||||||.||.|||||.||.|||||.||.||.||.||.|||
RBAM_008770__    251 ATTATTGCAACATCAGCTCGCCGTTCGCTTATGACGGAGAGGCCATCAAA    300

BSNT_01441___    301 TATATTGATTATGACTTAGATGTTAAGGTTTTTCCTGACATGACCTACAA    350
                     |||||||||||.||.||.|||||.|||||.|||||.||.|||||.||.||
RBAM_008770__    301 TATATTGATTACGATTTGGATGTCAAGGTGTTTCCGGATATGACGTATAA    350

BSNT_01441___    351 TATTCTCGATGAAGACGAATATGATGATCATCGGAAAGCCATGAATTATC    400
                     .|||||.||.||.||.|||||.|||||.||.||.|||.|.||||||||.|
RBAM_008770__    351 CATTCTTGACGAGGATGAATACGATGACCACCGCAAATCAATGAATTACC    400

BSNT_01441___    401 CAAAAGAAATCGACAGTATT-TTAAGAGACTACTTAAATACGCTGCTCCA    449
                     |.|||||.||||||||.||| |.||| ||.||..|.|||||||||||.||
RBAM_008770__    401 CTAAAGAGATCGACAGCATTCTGAAG-GAGTATCTGAATACGCTGCTGCA    449

BSNT_01441___    450 TTGGATTCACCAGCGTCAGGGACCGTTTGCGCCCGAGTTTGTCGATATGT    499
                     .||||||||.|||||..|.|||||||||||.||.||.|||||.|||||||
RBAM_008770__    450 CTGGATTCATCAGCGGAAAGGACCGTTTGCTCCGGAATTTGTTGATATGT    499

BSNT_01441___    500 GGTATGAACGGTATTTGCGCTATACAAAATAA    531
                     ||||||||||||||.|||||||||||||||||
RBAM_008770__    500 GGTATGAACGGTATCTGCGCTATACAAAATAA    531


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